Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU7-138P-201ENST00000459479 64 ntBASIC0.23□□□□□ -2.37
UPF3BQ9BZI7 AC109810.1-201ENST00000534066 224 ntBASIC0.23□□□□□ -2.37
UPF3BQ9BZI7 MIR4802-201ENST00000581881 80 ntBASIC0.23□□□□□ -2.37
UPF3BQ9BZI7 AC234772.3-201ENST00000602277 528 ntBASIC0.23□□□□□ -2.37
UPF3BQ9BZI7 SNORD11B-201ENST00000607707 90 ntBASIC0.23□□□□□ -2.37
UPF3BQ9BZI7 RNU6-606P-201ENST00000384721 111 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 OR9P1P-201ENST00000496431 281 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 AC105417.1-201ENST00000514691 285 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 SNORD111.1-201ENST00000516421 86 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 MIR4768-201ENST00000585270 74 ntBASIC0.22□□□□□ -2.37
UPF3BQ9BZI7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AL008987.1-201ENST00000415528 237 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC009961.2-201ENST00000435771 251 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC104332.1-201ENST00000440471 797 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 UBE2D3P4-201ENST00000441973 436 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 RPL39P5-202ENST00000512505 151 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 RNA5SP54-201ENST00000516951 92 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC023827.1-201ENST00000569247 97 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC011195.1-201ENST00000578177 177 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 AC092354.1-201ENST00000606057 376 ntBASIC0.21□□□□□ -2.38
UPF3BQ9BZI7 RNU6-1266P-201ENST00000362794 105 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 MRPS18CP6-201ENST00000423587 223 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 U8.21-201ENST00000459536 136 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 AL137161.1-201ENST00000532231 390 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 MIR3192-201ENST00000584920 77 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 U2.17-201ENST00000611454 95 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 AC007014.2-201ENST00000615581 479 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 AC007671.2-201ENST00000637344 619 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 AL390237.1-201ENST00000404226 1415 ntBASIC0.2□□□□□ -2.38
UPF3BQ9BZI7 RNU5F-7P-201ENST00000363696 115 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 MIR1-2-201ENST00000384961 85 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 RNA5SP222-201ENST00000411039 105 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 AC067940.1-201ENST00000458411 300 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 RNU7-12P-201ENST00000516030 62 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 RNA5SP454-201ENST00000517231 127 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 MRPS36P4-201ENST00000534436 298 ntBASIC0.19□□□□□ -2.38
UPF3BQ9BZI7 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 SNORD115-8-201ENST00000363856 82 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 SNORD115-38-201ENST00000365037 82 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 RNY1P8-201ENST00000383970 114 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 RNU6-30P-201ENST00000384561 107 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 RNA5SP482-201ENST00000391269 118 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 RNA5SP25-201ENST00000410815 110 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 AL663109.1-201ENST00000411498 844 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 USP9YP29-201ENST00000445112 563 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 UBE2V1P12-201ENST00000503954 474 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 RNU1-117P-201ENST00000517041 158 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 FRG2DP-202ENST00000566967 323 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 AL117336.2-201ENST00000602435 335 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 AC017083.3-201ENST00000609955 700 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 TUSC7.1-201ENST00000610969 165 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 AP002371.2-201ENST00000624450 503 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 MIR6079-201ENST00000635807 62 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
UPF3BQ9BZI7 SNORD111-201ENST00000408139 94 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 RNU6-177P-201ENST00000411257 104 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 AP000870.1-201ENST00000472927 406 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 RNU4-77P-201ENST00000516692 156 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 MTND1P5-201ENST00000517906 940 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 HIF1AP1-201ENST00000553642 175 ntBASIC0.17□□□□□ -2.38
UPF3BQ9BZI7 MIRLET7C-201ENST00000362160 84 ntBASIC0.16□□□□□ -2.38
UPF3BQ9BZI7 MIR513B-201ENST00000385136 84 ntBASIC0.16□□□□□ -2.38
UPF3BQ9BZI7 AF186996.7-201ENST00000492781 209 ntBASIC0.16□□□□□ -2.38
UPF3BQ9BZI7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.16□□□□□ -2.38
UPF3BQ9BZI7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.15□□□□□ -2.38
UPF3BQ9BZI7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 RNY4P34-201ENST00000364779 95 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 MIR140-201ENST00000385282 100 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 SNORD73A-201ENST00000386062 65 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 MTCO2P34-201ENST00000421994 607 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 MRPS10P1-201ENST00000448483 130 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 MTND2P14-201ENST00000482139 351 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AC091133.4-201ENST00000511142 308 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 RNU6-1198P-201ENST00000516904 67 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 RNU6-341P-201ENST00000516973 96 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 IGLVI-20-201ENST00000519296 130 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AP001372.4-201ENST00000524889 472 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms