Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC008121.3-201ENST00000618726 433 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC073544.1-201ENST00000600110 1595 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 BX322639.1-202ENST00000423987 2213 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 MIR340-201ENST00000362125 95 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 RNU4-56P-201ENST00000364700 142 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 RNU6-26P-201ENST00000383985 107 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 RNU6-708P-201ENST00000384217 107 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 SNORA67.2-201ENST00000384300 149 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 MIR1262-201ENST00000408276 93 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 RNA5SP504-201ENST00000410676 117 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AL354751.2-201ENST00000415471 210 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 MTCYBP10-201ENST00000424905 650 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 EIF1P2-201ENST00000428233 350 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC004386.2-201ENST00000441858 148 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 HMGN2P18-201ENST00000450680 270 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC034114.1-201ENST00000520293 285 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AK6P2-201ENST00000549020 471 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC020661.2-201ENST00000560114 134 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC125232.2-201ENST00000592457 143 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 AC100812.1-201ENST00000607622 580 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.27□□□□□ -2.21
RSPO3Q9BXY4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-545P-201ENST00000362681 104 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-873P-201ENST00000363833 107 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.364-201ENST00000365532 101 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-281P-201ENST00000384212 103 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-318P-201ENST00000384283 103 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNY1P14-201ENST00000384426 108 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-700P-201ENST00000391043 107 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 MTCYBP6-201ENST00000441810 138 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU7-87P-201ENST00000459343 62 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU7-169P-201ENST00000459456 61 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU4-77P-201ENST00000516692 156 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 RNU6-264P-201ENST00000517134 104 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 SNRPGP17-201ENST00000603780 214 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 MZT1P2-201ENST00000604387 248 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC016925.2-201ENST00000605108 242 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 SNORD58B-201ENST00000607313 66 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC007485.1-201ENST00000616755 206 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 AC005562.2-201ENST00000618264 111 ntBASIC1.26□□□□□ -2.21
RSPO3Q9BXY4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RNA5SP361-201ENST00000362686 118 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RNU6-338P-201ENST00000383888 105 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RNU1-139P-201ENST00000391307 165 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AL078595.1-201ENST00000404458 226 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC007098.1-201ENST00000420122 367 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AL590556.1-201ENST00000423231 483 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 MTND1P14-201ENST00000427400 950 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AL160004.2-201ENST00000432935 350 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AL357134.1-201ENST00000445848 426 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC093259.1-201ENST00000509755 300 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 SNORA25.14-201ENST00000516481 132 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RNU6-307P-201ENST00000516743 106 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC090617.3-201ENST00000573670 475 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 MIR5006-201ENST00000583027 110 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC044792.1-201ENST00000593294 196 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC092447.9-201ENST00000603395 144 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms