Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL162424.1-201ENST00000602325 221 ntBASIC-1.03□□□□□ -2.58
CSMD1Q96PZ7 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AC010154.1-201ENST00000425857 269 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AC009646.1-201ENST00000510455 318 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AC131235.4-201ENST00000609288 620 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 LARP1BP3-201ENST00000437229 869 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AL157687.1-201ENST00000554853 619 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 MIR4676-201ENST00000583078 72 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 BNIP3P30-201ENST00000601184 574 ntBASIC-1.04□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 MIR588-201ENST00000384900 83 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNU6-721P-201ENST00000410155 105 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 AC008521.1-201ENST00000587471 187 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 AC022022.2-201ENST00000602989 360 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNU6-343P-201ENST00000364709 104 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNU6-135P-201ENST00000516769 101 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 MRPS36P5-201ENST00000551909 298 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 YWHAEP3-201ENST00000582767 121 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 AC122133.1-201ENST00000613964 233 ntBASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.05□□□□□ -2.58
CSMD1Q96PZ7 RNA5SP48-201ENST00000363969 126 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU6-396P-201ENST00000365369 105 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU6-63P-201ENST00000516690 95 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 MIR3192-201ENST00000584920 77 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AC104260.1-201ENST00000616660 539 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 MTCO3P41-201ENST00000414801 328 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AC034229.4-201ENST00000607861 441 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AL359075.3-201ENST00000613288 217 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU6-364P-201ENST00000384387 107 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU2-47P-201ENST00000410649 186 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 SUMO1P3-201ENST00000439961 304 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 SNRPEP8-201ENST00000442866 260 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AL353752.1-201ENST00000454946 260 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AC024995.1-201ENST00000523014 93 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 AL442663.2-201ENST00000554385 511 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 MIR4275-201ENST00000636486 87 ntBASIC-1.06□□□□□ -2.58
CSMD1Q96PZ7 RNU6-655P-201ENST00000362858 107 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 SNORD115-28-201ENST00000363931 81 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 RNU2-15P-201ENST00000410692 191 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AL354692.1-201ENST00000423044 315 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 FO393419.3-201ENST00000428741 282 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 OR6C5P-201ENST00000452388 923 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 TMEM251P1-201ENST00000503717 318 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 MIR4778-201ENST00000577635 80 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 RNU4-21P-201ENST00000362802 126 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 SNORA67.2-201ENST00000384300 149 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 SNORD56B-201ENST00000384713 71 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 MTND1P4-201ENST00000435196 415 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AL929288.2-201ENST00000446368 407 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 SNORD31B-201ENST00000364977 69 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 MIR186-201ENST00000384988 86 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 U8.16-201ENST00000391279 133 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 MTCO2P33-201ENST00000402100 465 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 RNU2-23P-201ENST00000410545 195 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC007919.1-201ENST00000429380 217 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC010468.3-201ENST00000508225 458 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 RNU6-469P-201ENST00000516253 101 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC079610.2-201ENST00000604818 690 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AL357078.3-201ENST00000607528 618 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 AC027449.1-201ENST00000608890 407 ntBASIC-1.07□□□□□ -2.58
CSMD1Q96PZ7 BX322639.1-202ENST00000423987 2213 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 RNY3P11-201ENST00000364153 102 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 RNU6-613P-201ENST00000410412 108 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AC106883.1-201ENST00000418805 562 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms