Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL023284.1-201ENST00000403956 276 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 AC113618.1-201ENST00000416747 285 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 DPH3P2-201ENST00000422618 250 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 HMGN2P38-201ENST00000423806 265 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 SCARNA15.1-201ENST00000516384 125 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 AC009127.3-201ENST00000570531 403 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 MIR6132-201ENST00000622083 109 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 AC006001.4-201ENST00000622243 395 ntBASIC2.67□□□□□ -1.98
CHMP4CQ96CF2 MIR410-201ENST00000362222 80 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 RNA5SP493-201ENST00000364115 91 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 RNU6-20P-201ENST00000384106 107 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 BX510359.4-201ENST00000423750 193 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 RNA5SP200-201ENST00000516360 103 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 SNORA40.15-201ENST00000516884 107 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 AP005660.1-201ENST00000522972 293 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 AC131281.1-201ENST00000522984 164 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 AC009831.4-201ENST00000620744 325 ntBASIC2.66□□□□□ -1.98
CHMP4CQ96CF2 Y_RNA.162-201ENST00000363683 102 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.720-201ENST00000517166 92 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 MIR4529-201ENST00000578110 78 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 RAC1P9-201ENST00000604990 392 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 AL021879.1-201ENST00000611756 288 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 PART1_1.1-201ENST00000611761 217 ntBASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.145-201ENST00000363527 102 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.210-201ENST00000364161 110 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.230-201ENST00000364348 109 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 SNORA64-201ENST00000384674 134 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 RNU11-3P-201ENST00000391111 133 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 RNA5SP465-201ENST00000391195 109 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 MIR1253-201ENST00000408273 105 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 RNU6-130P-201ENST00000411112 103 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC005002.2-201ENST00000438228 269 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC104435.1-201ENST00000483483 166 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC025647.1-201ENST00000517879 253 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 SUMO2P18-201ENST00000518873 252 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC008737.2-201ENST00000599446 118 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC006380.1-201ENST00000603598 186 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AL360085.1-201ENST00000604713 532 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 AC004467.1-201ENST00000615678 330 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
CHMP4CQ96CF2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 AC007336.1-201ENST00000576365 3828 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.143-201ENST00000363520 106 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 SNORA63C-201ENST00000364578 129 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNA5SP37-201ENST00000365420 130 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU6-738P-201ENST00000384531 106 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU5A-5P-201ENST00000411054 116 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 AL390729.2-201ENST00000416137 156 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU6-327P-201ENST00000516270 127 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 RNU6-897P-201ENST00000517135 105 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 SNORA31.25-201ENST00000517242 134 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 AP002001.1-203ENST00000534002 267 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 MIR3684-201ENST00000579779 74 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 MIR4448-201ENST00000584360 86 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 AC091932.3-201ENST00000624223 323 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 AP000553.5-201ENST00000641933 54 ntBASIC2.63□□□□□ -1.99
CHMP4CQ96CF2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.153-201ENST00000363615 91 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AC073910.1-201ENST00000445047 438 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AL118496.2-201ENST00000448300 230 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 MRPS35P2-201ENST00000508242 191 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 HMGB3P3-201ENST00000510526 400 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AC011406.1-201ENST00000512440 370 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 MIR3169-201ENST00000578032 83 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AC078899.2-201ENST00000595282 212 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 MIR6715A-201ENST00000615929 79 ntBASIC2.62□□□□□ -1.99
CHMP4CQ96CF2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 RNU6-937P-201ENST00000384325 106 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 MIR597-201ENST00000384968 97 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AC060773.1-201ENST00000421698 310 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 HMGN2P34-201ENST00000437647 269 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AL353689.1-201ENST00000438895 199 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AC090255.1-201ENST00000495779 349 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 YWHAEP4-201ENST00000505390 198 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AC011373.1-201ENST00000607270 237 ntBASIC2.61□□□□□ -1.99
CHMP4CQ96CF2 AL596028.1-201ENST00000326971 197 ntBASIC2.6□□□□□ -1.99
CHMP4CQ96CF2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.6□□□□□ -1.99
CHMP4CQ96CF2 Y_RNA.459-201ENST00000384251 102 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms