Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR95-201ENST00000385072 81 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 POLR2KP2-201ENST00000438155 177 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 RNU6-155P-201ENST00000516347 100 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 RNU6-965P-201ENST00000516721 96 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
CLIP4Q8N3C7 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RNU6-454P-201ENST00000364292 107 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RNU6-338P-201ENST00000383888 105 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 MIR548B-201ENST00000385247 97 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RNU2-54P-201ENST00000410299 190 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AC009963.1-201ENST00000417265 157 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 MRPS10P1-201ENST00000448483 130 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AL139109.1-201ENST00000455491 297 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 BX284668.6-201ENST00000606899 438 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 MIR6852-201ENST00000621699 66 ntBASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CLIP4Q8N3C7 SNORA25.1-201ENST00000362326 128 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 Y_RNA.44-201ENST00000362676 108 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 Y_RNA.515-201ENST00000384535 112 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 MIR586-201ENST00000385035 97 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC109329.2-201ENST00000519658 482 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC018630.3-201ENST00000542637 96 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 MIR4643-201ENST00000577473 78 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC006380.1-201ENST00000603598 186 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC103810.6-201ENST00000606708 136 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 U2.14-201ENST00000615943 113 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 AC008873.1-201ENST00000625051 138 ntBASIC2.16□□□□□ -2.06
CLIP4Q8N3C7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLIP4Q8N3C7 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU1-23P-201ENST00000363361 144 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU6-546P-201ENST00000383991 107 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 MIR300-201ENST00000401138 83 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU2-63P-201ENST00000410792 194 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU2-32P-201ENST00000411193 191 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 MTCO1P5-201ENST00000433573 344 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 ATP5EP1-201ENST00000510257 156 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 SNORA48.11-201ENST00000517015 89 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RNU2-12P-201ENST00000517216 168 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 RPL21P9-201ENST00000556149 474 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 MIR1248-201ENST00000629190 106 ntBASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLIP4Q8N3C7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.136-201ENST00000363444 102 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 RNU6-324P-201ENST00000363957 106 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 RNA5SP240-201ENST00000365355 128 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 RNU6-514P-201ENST00000384208 107 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 TOMM22P2-201ENST00000430735 237 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms