Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-107P-201ENST00000516643 102 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 APOOP3-201ENST00000536787 586 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 AC125232.2-201ENST00000592457 143 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MIR1244-1-201ENST00000612829 85 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MIR1244-3-201ENST00000635744 85 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MIR1244-2-201ENST00000636449 85 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MIR1244-4-202ENST00000636813 85 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-879P-201ENST00000364328 108 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 SNORA63D-201ENST00000364359 132 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.303-201ENST00000364998 94 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 SNORA72.2-201ENST00000365028 127 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.358-201ENST00000365491 99 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 MIR515-2-201ENST00000384883 83 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 MIR515-1-201ENST00000384884 83 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 MIR329-1-201ENST00000385028 80 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 SNORA75.6-201ENST00000391318 127 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 MTND4P18-201ENST00000447010 465 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 AC112492.4-201ENST00000456549 352 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 U8.22-201ENST00000459141 133 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-120P-201ENST00000516077 103 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-264P-201ENST00000517134 104 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP437-201ENST00000517249 129 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 AC022868.1-201ENST00000517767 391 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 AC091144.1-201ENST00000519573 138 ntBASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.36□□□□□ -2.19
C9orf40Q8IXQ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP361-201ENST00000362686 118 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP467-201ENST00000391274 118 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 AC069257.2-201ENST00000441819 155 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 RPL30P15-201ENST00000457129 321 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.653-201ENST00000459091 95 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 MIR2053-201ENST00000459295 91 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 AC091951.2-201ENST00000500762 203 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 HMGN1P13-201ENST00000505795 138 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 CYCSP23-201ENST00000519781 313 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 FRG2DP-202ENST00000566967 323 ntBASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.387-201ENST00000383918 102 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-890P-201ENST00000384121 107 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1145P-201ENST00000384246 107 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1297P-201ENST00000384415 104 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 MIR30A-201ENST00000385092 71 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP323-201ENST00000391094 133 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 TOMM22P2-201ENST00000430735 237 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 UQCRBP2-201ENST00000447827 297 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 MTCO3P10-201ENST00000455912 772 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RPL36AP21-201ENST00000490372 323 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC022493.2-201ENST00000506122 481 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC025465.3-201ENST00000510570 311 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP458-201ENST00000516188 119 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-277P-201ENST00000516272 106 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 SUB1P3-201ENST00000564581 315 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC025253.1-201ENST00000613623 543 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 AC133104.2-201ENST00000615272 193 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 MIR1302-1-201ENST00000637932 143 ntBASIC1.34□□□□□ -2.19
C9orf40Q8IXQ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-414P-201ENST00000363705 104 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.384-201ENST00000383909 102 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 MIR625-201ENST00000385047 85 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-1156P-201ENST00000410365 100 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC114482.1-201ENST00000418010 247 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC073910.1-201ENST00000445047 438 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC008834.1-201ENST00000511612 175 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 RN7SKP49-201ENST00000516675 260 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 RNA5SP481-201ENST00000516814 122 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 MIR548S-201ENST00000581352 82 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC022432.1-201ENST00000595739 310 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AL132765.2-201ENST00000610812 351 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AL357075.2-201ENST00000614906 189 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms