Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.72□□□□□ -2.13
CCDC60Q8IWA6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.72□□□□□ -2.13
CCDC60Q8IWA6 snoZ196.1-201ENST00000625269 89 ntBASIC1.72□□□□□ -2.13
CCDC60Q8IWA6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.577-201ENST00000384794 101 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 RNU6-1156P-201ENST00000410365 100 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 RNU7-95P-201ENST00000459222 64 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 AK6P2-201ENST00000549020 471 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC60Q8IWA6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 RNU4-73P-201ENST00000363164 141 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 U3.8-201ENST00000363675 217 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 RNY3P11-201ENST00000364153 102 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 RNU1-96P-201ENST00000364163 162 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 AC114482.1-201ENST00000418010 247 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 HMGN2P34-201ENST00000437647 269 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 UBE2V1P7-201ENST00000446395 340 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 ELOCP24-201ENST00000456370 334 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 RNU7-169P-201ENST00000459456 61 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 SNORD19B-201ENST00000459623 84 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 MTND3P22-201ENST00000510932 243 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 SUB1P3-201ENST00000564581 315 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 MIR4498-201ENST00000577599 66 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 MIR4795-201ENST00000584182 89 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 AC126177.8-201ENST00000618339 1015 ntBASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CCDC60Q8IWA6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.314-201ENST00000365114 102 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 MIR329-1-201ENST00000385028 80 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 MIR1253-201ENST00000408273 105 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 MRPS18CP6-201ENST00000423587 223 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AC099677.2-201ENST00000436385 175 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AC092473.1-201ENST00000441098 221 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 UQCRBP2-201ENST00000447827 297 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AC091144.1-201ENST00000519573 138 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.69□□□□□ -2.14
CCDC60Q8IWA6 AC073544.1-201ENST00000600110 1595 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RNU6-1040P-201ENST00000383974 107 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 MT-TD-201ENST00000387419 68 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 SNORA69.1-201ENST00000390904 137 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.605-201ENST00000410577 105 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 AC236972.2-201ENST00000434979 310 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RNU7-4P-201ENST00000516961 62 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RNU6-699P-201ENST00000517081 110 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 AL357075.2-201ENST00000614906 189 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 MTND5P10-201ENST00000603719 1809 ntBASIC1.68□□□□□ -2.14
CCDC60Q8IWA6 RNU6-417P-201ENST00000384712 107 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 MIR559-201ENST00000385188 96 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 MIR1185-2-201ENST00000408687 86 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 RNA5SP100-201ENST00000410903 110 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 RNA5SP59-201ENST00000410922 110 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 RPL23AP36-201ENST00000413895 458 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AC016909.1-201ENST00000415916 166 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AC008134.1-201ENST00000420943 193 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 RNU6-221P-201ENST00000459541 99 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 SNORA31.24-201ENST00000517232 57 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AC025647.1-201ENST00000517879 253 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AC069114.2-201ENST00000604699 304 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 AL008636.1-201ENST00000625038 1018 ntBASIC1.67□□□□□ -2.14
CCDC60Q8IWA6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 RNU6-490P-201ENST00000362985 107 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.146-201ENST00000363549 102 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 RNU6-318P-201ENST00000384283 103 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AL117342.1-201ENST00000404861 406 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 Y_RNA.592-201ENST00000410274 109 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 NDUFB4P10-201ENST00000452541 359 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms