Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR181A1-201ENST00000385026 110 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-373P-201ENST00000411247 98 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AC093303.1-201ENST00000514549 295 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU7-175P-201ENST00000515915 61 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-864P-201ENST00000516256 108 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-1314P-201ENST00000517139 104 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AC091144.1-201ENST00000519573 138 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AC027419.1-201ENST00000522976 328 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-1059P-201ENST00000363752 98 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RNU5F-3P-201ENST00000363767 117 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.554-201ENST00000384672 102 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RPL23AP36-201ENST00000413895 458 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AC016907.1-201ENST00000419483 435 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 SNORD65B-201ENST00000459126 73 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RPL39P38-201ENST00000467018 153 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AC092991.1-201ENST00000477176 376 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-1088P-201ENST00000516850 104 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-165P-201ENST00000517170 99 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 APOOP3-201ENST00000536787 586 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 MIR4438-201ENST00000585271 93 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AC010999.1-201ENST00000611856 324 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 AC100810.6-201ENST00000638068 285 ntBASIC1.01□□□□□ -2.25
NUDCD3Q8IVD9 RNY4P14-201ENST00000363656 96 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.184-201ENST00000363884 108 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-595P-201ENST00000363944 107 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-596P-201ENST00000365395 98 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.436-201ENST00000384097 102 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-831P-201ENST00000384548 107 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1□□□□□ -2.25
NUDCD3Q8IVD9 MTND3P23-201ENST00000431980 347 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
NUDCD3Q8IVD9 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-107P-201ENST00000516643 102 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
NUDCD3Q8IVD9 AC023157.2-201ENST00000540596 141 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 AC106754.2-201ENST00000623006 233 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 ZNF299P-201ENST00000406845 1804 ntBASIC1□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.9-201ENST00000362354 101 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-222P-201ENST00000362438 107 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-505P-201ENST00000384427 107 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 USP9YP30-201ENST00000430729 455 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 MRPS10P1-201ENST00000448483 130 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 RPS27P22-201ENST00000478056 241 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 AC080013.6-201ENST00000606185 215 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 snoU13.31-201ENST00000607291 104 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 AC073349.3-201ENST00000617616 186 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 AL513423.1-201ENST00000621695 132 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 SNORD3E-202ENST00000627253 216 ntBASIC0.99□□□□□ -2.25
NUDCD3Q8IVD9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AC018630.2-201ENST00000534866 2403 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.48-201ENST00000362710 103 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.89-201ENST00000363031 102 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU1-22P-201ENST00000363334 158 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.327-201ENST00000365201 102 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-842P-201ENST00000384269 107 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.595-201ENST00000410403 105 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AC009161.1-201ENST00000417306 376 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 STAG3L5P-204ENST00000443759 179 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU7-94P-201ENST00000459576 63 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AC010469.2-201ENST00000496412 480 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-237P-201ENST00000515985 71 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-1114P-201ENST00000516022 107 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.683-201ENST00000516508 93 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AC012557.2-201ENST00000605919 418 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AL022345.2-201ENST00000606307 135 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 BX284668.6-201ENST00000606899 438 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 MIR6128-201ENST00000615528 109 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 AC091895.1-201ENST00000624494 256 ntBASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.98□□□□□ -2.25
NUDCD3Q8IVD9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 Y_RNA.450-201ENST00000384198 113 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 RNU6-281P-201ENST00000384212 103 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 MIR660-201ENST00000385235 97 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 RNU1-139P-201ENST00000391307 165 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 USMG5P1-201ENST00000425964 177 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 USP9YP16-201ENST00000430287 407 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 AC092473.1-201ENST00000441098 221 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 MTND1P17-201ENST00000448961 204 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 USP9YP23-201ENST00000455085 407 ntBASIC0.97□□□□□ -2.25
NUDCD3Q8IVD9 AC108729.3-201ENST00000513484 108 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms