Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AC140059.1-201ENST00000489238 361 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 MIR3117-201ENST00000584034 78 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AC009779.6-201ENST00000603972 165 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AL442067.1-201ENST00000613261 223 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AC004467.1-201ENST00000615678 330 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 AC091932.3-201ENST00000624223 323 ntBASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.8□□□□□ -1.96
UBE3BQ7Z3V4 SNORA72.2-201ENST00000365028 127 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 RNU2-54P-201ENST00000410299 190 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 Z98949.2-201ENST00000440996 144 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 RNU6-966P-201ENST00000516479 104 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 RNA5SP402-201ENST00000517148 110 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 AC105245.1-201ENST00000581934 244 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 AC090517.3-201ENST00000625170 141 ntBASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.79□□□□□ -1.96
UBE3BQ7Z3V4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 SNORA64-201ENST00000384674 134 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 MT-TR-201ENST00000387439 65 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 RNU2-14P-201ENST00000411053 191 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AL445687.1-201ENST00000439946 251 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 RNU4-71P-201ENST00000516258 113 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AL109918.3-201ENST00000603072 338 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AC037487.3-201ENST00000606668 112 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AC006001.4-201ENST00000622243 395 ntBASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UBE3BQ7Z3V4 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.97
UBE3BQ7Z3V4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 U3.8-201ENST00000363675 217 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-944P-201ENST00000364023 107 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 SNORD87-201ENST00000364849 89 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 MIR586-201ENST00000385035 97 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNA5SP475-201ENST00000410568 110 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNU2-64P-201ENST00000411315 191 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 POLR2KP2-201ENST00000438155 177 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RPL23AP3-201ENST00000453844 468 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNU2-12P-201ENST00000517216 168 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-586P-201ENST00000517265 104 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 MIR4643-201ENST00000577473 78 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 MIR3124-201ENST00000582636 67 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AC069294.1-201ENST00000608397 350 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AL137847.3-201ENST00000611521 109 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 MIR6715A-201ENST00000615929 79 ntBASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
UBE3BQ7Z3V4 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 UBE2WP1-201ENST00000362030 340 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-454P-201ENST00000364292 107 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-200P-201ENST00000364743 107 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 SNORA67.3-201ENST00000384366 140 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 MIR95-201ENST00000385072 81 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 AL023284.1-201ENST00000403956 276 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 MIR1294-201ENST00000408503 142 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 TOMM22P2-201ENST00000430735 237 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 MTCO1P5-201ENST00000433573 344 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 AL139109.1-201ENST00000455491 297 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 snoU13.15-201ENST00000459407 104 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 IGKV3-31-201ENST00000523109 329 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.76□□□□□ -1.97
UBE3BQ7Z3V4 SNORA25.1-201ENST00000362326 128 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 MIR218-1-201ENST00000384999 110 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 MRPS10P1-201ENST00000448483 130 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 snoU13.26-201ENST00000459452 105 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.700-201ENST00000516806 100 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 RNU1-117P-201ENST00000517041 158 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms