Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU4-21P-201ENST00000362802 126 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-226P-201ENST00000363778 107 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-142P-201ENST00000384019 107 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-447P-201ENST00000410293 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-355P-201ENST00000410427 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-791P-201ENST00000410467 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-860P-201ENST00000410860 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-370P-201ENST00000411008 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 RNU6-785P-201ENST00000411324 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 AC015818.7-201ENST00000428754 109 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 AC087499.7-201ENST00000441958 109 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 BTBD7P2-201ENST00000441962 620 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 AC009237.7-201ENST00000447357 229 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.82□□□□□ -2.7
TFF3Q07654 DPPA3P3-201ENST00000603842 430 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 U6.90-201ENST00000614007 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 U6.70-201ENST00000620287 104 ntBASIC-1.82□□□□□ -2.7
TFF3Q07654 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
TFF3Q07654 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.83□□□□□ -2.7
TFF3Q07654 SNORA63C-201ENST00000364578 129 ntBASIC-1.83□□□□□ -2.7
TFF3Q07654 MT-TN-201ENST00000387400 73 ntBASIC-1.83□□□□□ -2.7
TFF3Q07654 RPS3AP3-201ENST00000411933 242 ntBASIC-1.83□□□□□ -2.7
TFF3Q07654 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.83□□□□□ -2.7
TFF3Q07654 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.83□□□□□ -2.7
TFF3Q07654 FGF7P1-201ENST00000582820 288 ntBASIC-1.83□□□□□ -2.7
TFF3Q07654 RNU6-77P-201ENST00000410554 91 ntBASIC-1.84□□□□□ -2.7
TFF3Q07654 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.84□□□□□ -2.7
TFF3Q07654 AC104383.1-201ENST00000530297 370 ntBASIC-1.84□□□□□ -2.7
TFF3Q07654 RPL21P9-201ENST00000556149 474 ntBASIC-1.84□□□□□ -2.7
TFF3Q07654 SNORD92-201ENST00000585078 85 ntBASIC-1.84□□□□□ -2.7
TFF3Q07654 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.84□□□□□ -2.7
TFF3Q07654 AC010999.1-201ENST00000611856 324 ntBASIC-1.84□□□□□ -2.7
TFF3Q07654 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.84□□□□□ -2.7
TFF3Q07654 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 MTND3P17-201ENST00000416968 344 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.85□□□□□ -2.71
TFF3Q07654 RNU7-73P-201ENST00000458743 63 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 RNU7-94P-201ENST00000459576 63 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 MTND3P5-201ENST00000512798 333 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AC046134.1-201ENST00000514454 666 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 RNU6-135P-201ENST00000516769 101 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 SNORA74.3-201ENST00000517108 154 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AC026421.1-201ENST00000519101 163 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AGGF1P4-201ENST00000568249 801 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AC006600.1-201ENST00000572529 153 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AC090617.3-201ENST00000573670 475 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 AC012507.3-201ENST00000603556 477 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 U6.101-201ENST00000637707 76 ntBASIC-1.85□□□□□ -2.71
TFF3Q07654 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 RNU6-359P-201ENST00000365466 108 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 SNORA67.2-201ENST00000384300 149 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AC006210.1-201ENST00000424882 111 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AL627311.1-201ENST00000431514 115 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.86□□□□□ -2.71
TFF3Q07654 AC007547.1-201ENST00000462177 490 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.86□□□□□ -2.71
TFF3Q07654 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 RNU6-143P-201ENST00000516942 93 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AP001372.4-201ENST00000524889 472 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AC023538.1-201ENST00000534576 736 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 AC104260.1-201ENST00000616660 539 ntBASIC-1.86□□□□□ -2.71
TFF3Q07654 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 RNU6-619P-201ENST00000365146 108 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 MIR215-201ENST00000384858 110 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 RNA5SP201-201ENST00000410316 124 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.87□□□□□ -2.71
TFF3Q07654 RNU6-948P-201ENST00000516374 107 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.87□□□□□ -2.71
TFF3Q07654 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.88□□□□□ -2.71
TFF3Q07654 RNU6-25P-201ENST00000383873 107 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 RNU6-364P-201ENST00000384387 107 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 RNU6-29P-201ENST00000384637 107 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 MIR300-201ENST00000401138 83 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.88□□□□□ -2.71
TFF3Q07654 RNU7-43P-201ENST00000516554 64 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 AC134698.4-201ENST00000523451 826 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.88□□□□□ -2.71
TFF3Q07654 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.88□□□□□ -2.71
TFF3Q07654 ZNF971P-201ENST00000562068 1249 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 MIR5591-201ENST00000578248 65 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 AC121247.2-201ENST00000604776 136 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 AC005609.4-201ENST00000625071 447 ntBASIC-1.88□□□□□ -2.71
TFF3Q07654 U8.6-201ENST00000364939 135 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 RNU6-396P-201ENST00000365369 105 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 RNA5SP482-201ENST00000391269 118 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.89□□□□□ -2.71
TFF3Q07654 AC005002.2-201ENST00000438228 269 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 AC006026.2-201ENST00000457376 180 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 RNA5SP33-201ENST00000516687 98 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 AC018448.1-201ENST00000552843 316 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms