Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-179P-201ENST00000363350 107 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 MIR15B-201ENST00000385045 98 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 MIR320B2-201ENST00000408479 138 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 MRPS10P1-201ENST00000448483 130 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 RNU7-159P-201ENST00000459284 62 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 AC079140.5-201ENST00000507882 310 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 RNU6-341P-201ENST00000516973 96 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 AC023442.1-201ENST00000531247 422 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 AC008507.2-201ENST00000588402 1176 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 MIR8064-201ENST00000612863 90 ntBASIC-0.62□□□□□ -2.51
HIST1H1AQ02539 SNORA18.1-201ENST00000363418 128 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 snoU13.21-201ENST00000459368 105 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 MTND2P38-201ENST00000522536 667 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 AC012433.1-201ENST00000588916 398 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 AC104260.1-201ENST00000616660 539 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 AC006435.5-201ENST00000624486 112 ntBASIC-0.63□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 RNU6-934P-201ENST00000365154 107 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 RNU6-116P-201ENST00000384042 109 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 MIR454-201ENST00000390180 115 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 MTCO2P23-201ENST00000425216 680 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 HMGN2P22-201ENST00000427588 175 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 RNU7-129P-201ENST00000516128 62 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.64□□□□□ -2.51
HIST1H1AQ02539 SNORA36.1-201ENST00000363424 132 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-925P-201ENST00000384629 104 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-269P-201ENST00000391077 97 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 MTCYBP36-201ENST00000404146 440 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU4-46P-201ENST00000410818 138 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 AC015818.7-201ENST00000428754 109 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RPL22P17-201ENST00000438729 315 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 Z98949.2-201ENST00000440996 144 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 AC087499.7-201ENST00000441958 109 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-848P-201ENST00000515948 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-617P-201ENST00000516147 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-473P-201ENST00000516164 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 AC120024.3-201ENST00000603167 156 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 AC240442.1-201ENST00000616055 283 ntBASIC-0.65□□□□□ -2.51
HIST1H1AQ02539 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
HIST1H1AQ02539 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 SNORD114-12-201ENST00000365400 75 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR7-2-201ENST00000384970 110 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR625-201ENST00000385047 85 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR1298-201ENST00000408783 112 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AC098592.1-201ENST00000419352 333 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AC119618.1-201ENST00000434191 222 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AC069271.1-201ENST00000445577 156 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AC005042.3-201ENST00000453230 174 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 RNU7-165P-201ENST00000458864 60 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 RPS29P27-201ENST00000463711 170 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AC091021.1-201ENST00000468051 388 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 RNU6-323P-201ENST00000521915 107 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MTATP6P25-201ENST00000574491 261 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR4771-2-201ENST00000577758 74 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR4771-1-201ENST00000582617 74 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 AL512427.1-201ENST00000618593 349 ntBASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
HIST1H1AQ02539 MIR377-201ENST00000362145 69 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 RNU6-715P-201ENST00000365204 103 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 RPL17P19-201ENST00000489069 552 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 RPL21P9-201ENST00000556149 474 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 MIR4676-201ENST00000583078 72 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 AC091178.2-201ENST00000584401 117 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 AL592221.1-201ENST00000605266 382 ntBASIC-0.67□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 RNU4-1-201ENST00000363925 141 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 RNU6-580P-201ENST00000365159 107 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 SNORA2A-201ENST00000383885 135 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 SNORA8.3-201ENST00000384679 139 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 MIR516B2-201ENST00000385190 85 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 RNA5SP494-201ENST00000410653 129 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 MTCO3P19-201ENST00000415864 321 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 PIGPP3-201ENST00000425307 415 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 AC079781.2-201ENST00000446424 169 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 RNU4-49P-201ENST00000516080 140 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 SNORA18.7-201ENST00000516910 131 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 SNORD11B-201ENST00000607707 90 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 AL121895.2-201ENST00000619558 447 ntBASIC-0.68□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 SNORA32.3-201ENST00000384772 121 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms