Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
IRX3P78415 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC016717.1-201ENST00000448918 286 ntBASIC1.1□□□□□ -2.23
IRX3P78415 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.1□□□□□ -2.23
IRX3P78415 RNU7-187P-201ENST00000458985 68 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.1□□□□□ -2.23
IRX3P78415 CYCSP23-201ENST00000519781 313 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC004584.2-201ENST00000570407 410 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.1□□□□□ -2.23
IRX3P78415 MIR3684-201ENST00000579779 74 ntBASIC1.1□□□□□ -2.23
IRX3P78415 MIR3937-201ENST00000580135 106 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC022432.1-201ENST00000595739 310 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC019193.3-201ENST00000609144 554 ntBASIC1.1□□□□□ -2.23
IRX3P78415 AC006435.5-201ENST00000624486 112 ntBASIC1.1□□□□□ -2.23
IRX3P78415 Y_RNA.9-201ENST00000362354 101 ntBASIC1.09□□□□□ -2.23
IRX3P78415 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
IRX3P78415 RNU6-451P-201ENST00000362921 107 ntBASIC1.09□□□□□ -2.23
IRX3P78415 Y_RNA.319-201ENST00000365138 92 ntBASIC1.09□□□□□ -2.23
IRX3P78415 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.09□□□□□ -2.23
IRX3P78415 Y_RNA.402-201ENST00000383972 102 ntBASIC1.09□□□□□ -2.23
IRX3P78415 Y_RNA.414-201ENST00000384011 101 ntBASIC1.09□□□□□ -2.23
IRX3P78415 RNU6-1013P-201ENST00000384180 107 ntBASIC1.09□□□□□ -2.23
IRX3P78415 RNU6-95P-201ENST00000384697 107 ntBASIC1.09□□□□□ -2.23
IRX3P78415 RNU6-541P-201ENST00000384709 110 ntBASIC1.09□□□□□ -2.23
IRX3P78415 MIR32-201ENST00000384965 70 ntBASIC1.09□□□□□ -2.23
IRX3P78415 AC009161.1-201ENST00000417306 376 ntBASIC1.09□□□□□ -2.23
IRX3P78415 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.09□□□□□ -2.23
IRX3P78415 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.09□□□□□ -2.23
IRX3P78415 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.09□□□□□ -2.23
IRX3P78415 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.09□□□□□ -2.23
IRX3P78415 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
IRX3P78415 MIR5696-201ENST00000578474 85 ntBASIC1.09□□□□□ -2.23
IRX3P78415 AC092954.2-201ENST00000609103 430 ntBASIC1.09□□□□□ -2.23
IRX3P78415 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
IRX3P78415 RNU4-24P-201ENST00000364565 139 ntBASIC1.08□□□□□ -2.24
IRX3P78415 Y_RNA.287-201ENST00000364853 94 ntBASIC1.08□□□□□ -2.24
IRX3P78415 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
IRX3P78415 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
IRX3P78415 RNU6-417P-201ENST00000384712 107 ntBASIC1.08□□□□□ -2.24
IRX3P78415 MIR548B-201ENST00000385247 97 ntBASIC1.08□□□□□ -2.24
IRX3P78415 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC004866.1-201ENST00000411748 78 ntBASIC1.08□□□□□ -2.24
IRX3P78415 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.08□□□□□ -2.24
IRX3P78415 MTCO3P18-201ENST00000440206 761 ntBASIC1.08□□□□□ -2.24
IRX3P78415 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.08□□□□□ -2.24
IRX3P78415 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.08□□□□□ -2.24
IRX3P78415 MTND1P11-201ENST00000456661 876 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AL163195.1-201ENST00000496941 348 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.08□□□□□ -2.24
IRX3P78415 RNU7-175P-201ENST00000515915 61 ntBASIC1.08□□□□□ -2.24
IRX3P78415 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC245505.1-201ENST00000556398 224 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC015540.1-201ENST00000615828 501 ntBASIC1.08□□□□□ -2.24
IRX3P78415 MIR6779-201ENST00000617283 64 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC006001.4-201ENST00000622243 395 ntBASIC1.08□□□□□ -2.24
IRX3P78415 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
IRX3P78415 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.08□□□□□ -2.24
IRX3P78415 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
IRX3P78415 RNU6-623P-201ENST00000363143 105 ntBASIC1.07□□□□□ -2.24
IRX3P78415 Y_RNA.151-201ENST00000363566 112 ntBASIC1.07□□□□□ -2.24
IRX3P78415 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
IRX3P78415 SNORD116-11-201ENST00000383882 92 ntBASIC1.07□□□□□ -2.24
IRX3P78415 MIR517A-201ENST00000385001 87 ntBASIC1.07□□□□□ -2.24
IRX3P78415 MIR1185-2-201ENST00000408687 86 ntBASIC1.07□□□□□ -2.24
IRX3P78415 Y_RNA.615-201ENST00000410769 117 ntBASIC1.07□□□□□ -2.24
IRX3P78415 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.07□□□□□ -2.24
IRX3P78415 USMG5P1-201ENST00000425964 177 ntBASIC1.07□□□□□ -2.24
IRX3P78415 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.07□□□□□ -2.24
IRX3P78415 AC134698.4-201ENST00000523451 826 ntBASIC1.07□□□□□ -2.24
IRX3P78415 RNY4P14-201ENST00000363656 96 ntBASIC1.06□□□□□ -2.24
IRX3P78415 RNU6-793P-201ENST00000384233 104 ntBASIC1.06□□□□□ -2.24
IRX3P78415 MIR562-201ENST00000384894 95 ntBASIC1.06□□□□□ -2.24
IRX3P78415 MIR146A-201ENST00000385201 99 ntBASIC1.06□□□□□ -2.24
IRX3P78415 RNU6-159P-201ENST00000391080 106 ntBASIC1.06□□□□□ -2.24
IRX3P78415 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.06□□□□□ -2.24
IRX3P78415 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.06□□□□□ -2.24
IRX3P78415 RNU7-66P-201ENST00000459469 62 ntBASIC1.06□□□□□ -2.24
IRX3P78415 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.06□□□□□ -2.24
IRX3P78415 RNU6-314P-201ENST00000516574 104 ntBASIC1.06□□□□□ -2.24
IRX3P78415 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
IRX3P78415 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
IRX3P78415 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.06□□□□□ -2.24
IRX3P78415 AC040896.1-201ENST00000613819 479 ntBASIC1.06□□□□□ -2.24
IRX3P78415 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.06□□□□□ -2.24
IRX3P78415 U4.5-201ENST00000617137 123 ntBASIC1.06□□□□□ -2.24
IRX3P78415 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.06□□□□□ -2.24
IRX3P78415 AC095038.3-201ENST00000634439 195 ntBASIC1.06□□□□□ -2.24
IRX3P78415 Y_RNA.157-201ENST00000363638 102 ntBASIC1.05□□□□□ -2.24
IRX3P78415 Y_RNA.517-201ENST00000384551 106 ntBASIC1.05□□□□□ -2.24
IRX3P78415 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
IRX3P78415 RNU1-139P-201ENST00000391307 165 ntBASIC1.05□□□□□ -2.24
IRX3P78415 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
IRX3P78415 AL445305.1-201ENST00000432577 575 ntBASIC1.05□□□□□ -2.24
IRX3P78415 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.05□□□□□ -2.24
IRX3P78415 AC093303.1-201ENST00000514549 295 ntBASIC1.05□□□□□ -2.24
IRX3P78415 RNU7-99P-201ENST00000516271 62 ntBASIC1.05□□□□□ -2.24
IRX3P78415 Y_RNA.704-201ENST00000516851 102 ntBASIC1.05□□□□□ -2.24
IRX3P78415 RNU1-117P-201ENST00000517041 158 ntBASIC1.05□□□□□ -2.24
IRX3P78415 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms