Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL008636.1-201ENST00000625038 1018 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR4315-1-201ENST00000636800 73 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR4315-2-201ENST00000640925 73 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR330-201ENST00000362196 94 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 SNORD114-16-201ENST00000363044 70 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 SNORA42.1-201ENST00000363515 137 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 RNY4P34-201ENST00000364779 95 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 SNORA2B-201ENST00000384583 137 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 MIR520C-201ENST00000385005 87 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.1□□□□□ -2.43
HIST1H3AP68431 ZNF885P-201ENST00000420174 1098 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.1□□□□□ -2.43
HIST1H3AP68431 U8.21-201ENST00000459536 136 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AC091021.1-201ENST00000468051 388 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 MTND1P22-201ENST00000510572 951 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AC093027.1-201ENST00000546698 429 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.1□□□□□ -2.43
HIST1H3AP68431 EIF1P4-201ENST00000572664 335 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 FGF7P1-201ENST00000582820 288 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AC010620.1-201ENST00000601088 1102 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 AC091925.1-201ENST00000623204 462 ntBASIC-0.1□□□□□ -2.43
HIST1H3AP68431 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
HIST1H3AP68431 RNU6-833P-201ENST00000363486 107 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 RNU6-815P-201ENST00000384080 113 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.11□□□□□ -2.43
HIST1H3AP68431 SNORD65B-201ENST00000459126 73 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.11□□□□□ -2.43
HIST1H3AP68431 RNU7-172P-201ENST00000517125 64 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 MTND1P35-201ENST00000526739 508 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 AC104695.3-201ENST00000604052 296 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 U2.17-201ENST00000611454 95 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.11□□□□□ -2.43
HIST1H3AP68431 RNY1P4-201ENST00000384595 115 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 SNORD83.1-201ENST00000411362 77 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.12□□□□□ -2.43
HIST1H3AP68431 ELOCP24-201ENST00000456370 334 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
HIST1H3AP68431 RNU7-138P-201ENST00000459479 64 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 AC097462.1-201ENST00000514125 324 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 RNU6-341P-201ENST00000516973 96 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 AC011712.1-201ENST00000588959 234 ntBASIC-0.12□□□□□ -2.43
HIST1H3AP68431 RNA5SP48-201ENST00000363969 126 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 RNU6-654P-201ENST00000364373 107 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR489-201ENST00000384923 84 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR520G-201ENST00000385064 90 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR520H-201ENST00000385126 88 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 RNU6-679P-201ENST00000391003 106 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR450B-201ENST00000401182 78 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 RNU6-195P-201ENST00000411352 109 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 RNU11-2P-201ENST00000516898 142 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC069113.3-201ENST00000521019 150 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC023442.1-201ENST00000531247 422 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AK6P2-201ENST00000549020 471 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR3612-201ENST00000579753 87 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 MIR5190-201ENST00000581537 80 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC078938.1-201ENST00000620993 318 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC006435.5-201ENST00000624486 112 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 OR5AK4P-201ENST00000635912 903 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC007671.2-201ENST00000637344 619 ntBASIC-0.13□□□□□ -2.43
HIST1H3AP68431 AC073544.1-201ENST00000600110 1595 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 RNU6-108P-201ENST00000365558 107 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 RNU6-245P-201ENST00000384020 107 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 MIR520F-201ENST00000384824 87 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 MIR193B-201ENST00000384907 83 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 MIR452-201ENST00000385020 85 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 SNORA40.8-201ENST00000411034 126 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 MTCO3P19-201ENST00000415864 321 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 PIGPP3-201ENST00000425307 415 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 GMFBP1-201ENST00000467831 427 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 AC006566.1-201ENST00000608943 513 ntBASIC-0.14□□□□□ -2.43
HIST1H3AP68431 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
HIST1H3AP68431 RNU6-727P-201ENST00000363592 107 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 RNA5SP517-201ENST00000364724 117 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
HIST1H3AP68431 RNA5SP95-201ENST00000410319 137 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms