Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-221P-201ENST00000459541 99 ntBASIC1.87□□□□□ -2.11
CDH11P55287 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
CDH11P55287 AC022616.4-201ENST00000522985 181 ntBASIC1.87□□□□□ -2.11
CDH11P55287 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CDH11P55287 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH11P55287 MIR4659A-201ENST00000580269 81 ntBASIC1.87□□□□□ -2.11
CDH11P55287 PART1_1.1-201ENST00000611761 217 ntBASIC1.87□□□□□ -2.11
CDH11P55287 AP006437.1-201ENST00000641440 3685 ntBASIC1.87□□□□□ -2.11
CDH11P55287 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH11P55287 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CDH11P55287 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CDH11P55287 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
CDH11P55287 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
CDH11P55287 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC117470.1-201ENST00000381974 330 ntBASIC1.86□□□□□ -2.11
CDH11P55287 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
CDH11P55287 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC016909.1-201ENST00000415916 166 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC060773.1-201ENST00000421698 310 ntBASIC1.86□□□□□ -2.11
CDH11P55287 RAB28P5-201ENST00000427490 651 ntBASIC1.86□□□□□ -2.11
CDH11P55287 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.86□□□□□ -2.11
CDH11P55287 RPEP5-201ENST00000441137 268 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC114982.1-201ENST00000469402 321 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH11P55287 AL442663.2-201ENST00000554385 511 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC055872.1-201ENST00000570978 278 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AL121655.1-201ENST00000605811 308 ntBASIC1.86□□□□□ -2.11
CDH11P55287 Y_RNA.812-201ENST00000610788 101 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AL021879.1-201ENST00000611756 288 ntBASIC1.86□□□□□ -2.11
CDH11P55287 Y_RNA.784-201ENST00000613803 101 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AC040896.1-201ENST00000613819 479 ntBASIC1.86□□□□□ -2.11
CDH11P55287 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH11P55287 AC011476.5-201ENST00000615594 130 ntBASIC1.86□□□□□ -2.11
CDH11P55287 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH11P55287 Y_RNA.787-201ENST00000616522 101 ntBASIC1.86□□□□□ -2.11
CDH11P55287 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
CDH11P55287 Y_RNA.780-201ENST00000617336 101 ntBASIC1.86□□□□□ -2.11
CDH11P55287 Y_RNA.801-201ENST00000619005 101 ntBASIC1.86□□□□□ -2.11
CDH11P55287 snoZ196.1-201ENST00000625269 89 ntBASIC1.86□□□□□ -2.11
CDH11P55287 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDH11P55287 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH11P55287 RNU6-454P-201ENST00000364292 107 ntBASIC1.85□□□□□ -2.11
CDH11P55287 RNU6-926P-201ENST00000384075 107 ntBASIC1.85□□□□□ -2.11
CDH11P55287 SNORA40.19-201ENST00000390846 128 ntBASIC1.85□□□□□ -2.11
CDH11P55287 RNA5SP270-201ENST00000411361 118 ntBASIC1.85□□□□□ -2.11
CDH11P55287 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CDH11P55287 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
CDH11P55287 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH11P55287 RNU6-408P-201ENST00000515910 100 ntBASIC1.85□□□□□ -2.11
CDH11P55287 AC025647.1-201ENST00000517879 253 ntBASIC1.85□□□□□ -2.11
CDH11P55287 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
CDH11P55287 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
CDH11P55287 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
CDH11P55287 AC099654.10-201ENST00000640395 161 ntBASIC1.85□□□□□ -2.11
CDH11P55287 AC092881.1-201ENST00000638218 2733 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RNU6-450P-201ENST00000364654 107 ntBASIC1.84□□□□□ -2.11
CDH11P55287 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
CDH11P55287 Y_RNA.526-201ENST00000384572 110 ntBASIC1.84□□□□□ -2.11
CDH11P55287 Y_RNA.551-201ENST00000384661 102 ntBASIC1.84□□□□□ -2.11
CDH11P55287 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
CDH11P55287 MIR1252-201ENST00000408861 65 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RNU6-985P-201ENST00000410182 104 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RNU6-57P-201ENST00000411348 103 ntBASIC1.84□□□□□ -2.11
CDH11P55287 TOMM22P2-201ENST00000430735 237 ntBASIC1.84□□□□□ -2.11
CDH11P55287 HMGN2P3-201ENST00000433603 273 ntBASIC1.84□□□□□ -2.11
CDH11P55287 HMGN2P5-201ENST00000436882 273 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RNU6-625P-201ENST00000459412 107 ntBASIC1.84□□□□□ -2.11
CDH11P55287 Y_RNA.715-201ENST00000517082 110 ntBASIC1.84□□□□□ -2.11
CDH11P55287 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH11P55287 MIR4423-201ENST00000580922 80 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RPS29P30-201ENST00000600975 111 ntBASIC1.84□□□□□ -2.11
CDH11P55287 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH11P55287 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.15-201ENST00000611544 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.16-201ENST00000613119 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.12-201ENST00000613778 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.20-201ENST00000613956 192 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.9-201ENST00000615427 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.11-201ENST00000616345 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.2-201ENST00000616535 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.3-201ENST00000617785 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.19-201ENST00000618602 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 RNU2-1-201ENST00000618664 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.6-201ENST00000619225 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.5-201ENST00000619465 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 U2.10-201ENST00000620268 191 ntBASIC1.84□□□□□ -2.11
CDH11P55287 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.84□□□□□ -2.11
CDH11P55287 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH11P55287 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
CDH11P55287 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CDH11P55287 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDH11P55287 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH11P55287 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
CDH11P55287 SNORD115-3-201ENST00000363100 82 ntBASIC1.83□□□□□ -2.12
CDH11P55287 RNU4-50P-201ENST00000364361 141 ntBASIC1.83□□□□□ -2.12
CDH11P55287 SNORA63C-201ENST00000364578 129 ntBASIC1.83□□□□□ -2.12
CDH11P55287 Y_RNA.498-201ENST00000384460 102 ntBASIC1.83□□□□□ -2.12
CDH11P55287 Y_RNA.527-201ENST00000384573 102 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AL079342.1-201ENST00000401460 267 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AL117342.1-201ENST00000404861 406 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms