Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RPL21P1-201ENST00000399532 476 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 AL079342.1-201ENST00000401460 267 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RNU6-130P-201ENST00000411112 103 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 AL358176.2-201ENST00000425769 204 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RAB28P5-201ENST00000427490 651 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RNA5SP148-201ENST00000516527 94 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-1P43699 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-1P43699 AC022441.3-201ENST00000605737 136 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.8□□□□□ -2.12
NKX2-1P43699 AC009831.4-201ENST00000620744 325 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 MIR3674-201ENST00000636576 68 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-1P43699 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NKX2-1P43699 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.79□□□□□ -2.12
NKX2-1P43699 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NKX2-1P43699 Y_RNA.214-201ENST00000364201 112 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU4-52P-201ENST00000384209 138 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 Y_RNA.527-201ENST00000384573 102 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 SNORA67.4-201ENST00000384688 142 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 Y_RNA.570-201ENST00000384750 101 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU6-1109P-201ENST00000391187 107 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNA5SP475-201ENST00000410568 110 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NKX2-1P43699 AC096920.1-201ENST00000423991 241 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU6-625P-201ENST00000459412 107 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AC010655.3-201ENST00000478818 450 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AL049873.1-201ENST00000480540 376 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AC234781.5-201ENST00000508429 271 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU6-408P-201ENST00000515910 100 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU2-12P-201ENST00000517216 168 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AC025647.1-201ENST00000517879 253 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 MIR3162-201ENST00000581818 82 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AC136443.5-201ENST00000603741 370 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 AL360085.1-201ENST00000604713 532 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.15-201ENST00000611544 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.16-201ENST00000613119 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.12-201ENST00000613778 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.20-201ENST00000613956 192 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.9-201ENST00000615427 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.11-201ENST00000616345 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.2-201ENST00000616535 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.3-201ENST00000617785 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.19-201ENST00000618602 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 RNU2-1-201ENST00000618664 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.6-201ENST00000619225 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.5-201ENST00000619465 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 U2.10-201ENST00000620268 191 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 SDR42E1P4-201ENST00000620894 481 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 CTSLP2-204ENST00000629029 392 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 ZNF702P-202ENST00000434269 1966 ntBASIC1.79□□□□□ -2.12
NKX2-1P43699 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NKX2-1P43699 RNU6-770P-201ENST00000363929 105 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 RNA5SP138-201ENST00000365098 114 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 RNU6-20P-201ENST00000384106 107 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 MIR634-201ENST00000385208 97 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC008134.1-201ENST00000420943 193 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AL445305.1-201ENST00000432577 575 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.78□□□□□ -2.12
NKX2-1P43699 AC005002.2-201ENST00000438228 269 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AL731563.1-201ENST00000442202 214 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 RPL23AP7-203ENST00000449021 469 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.78□□□□□ -2.12
NKX2-1P43699 RNU6-327P-201ENST00000516270 127 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 RNU6-897P-201ENST00000517135 105 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.78□□□□□ -2.12
NKX2-1P43699 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX2-1P43699 AP002001.1-203ENST00000534002 267 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.78□□□□□ -2.12
NKX2-1P43699 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 RAC1P9-201ENST00000604990 392 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC046143.2-201ENST00000609789 160 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 MIR6132-201ENST00000622083 109 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 AC131280.1-202ENST00000624067 4211 ntBASIC1.78□□□□□ -2.12
NKX2-1P43699 Y_RNA.133-201ENST00000363428 110 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU6-727P-201ENST00000363592 107 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 Y_RNA.222-201ENST00000364264 102 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU6-454P-201ENST00000364292 107 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU6-418P-201ENST00000384035 107 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 Y_RNA.518-201ENST00000384552 113 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 MIR597-201ENST00000384968 97 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU2-54P-201ENST00000410299 190 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC113618.1-201ENST00000416747 285 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 MTND2P23-201ENST00000422990 651 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC018634.1-201ENST00000437554 401 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 ATP5J2P3-201ENST00000451550 258 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-1P43699 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU6-1146P-201ENST00000516282 102 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms