Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC090049.2-201ENST00000550377 109 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AL158211.1-201ENST00000566763 763 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AC119751.7-201ENST00000600494 245 ntBASIC0.76□□□□□ -2.29
RFC3P40938 RNU6-89P-201ENST00000606519 100 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AL158209.2-201ENST00000619266 216 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AP000568.1-201ENST00000282964 442 ntBASIC0.75□□□□□ -2.29
RFC3P40938 Y_RNA.354-201ENST00000365448 111 ntBASIC0.75□□□□□ -2.29
RFC3P40938 Y_RNA.415-201ENST00000384012 112 ntBASIC0.75□□□□□ -2.29
RFC3P40938 RNU6-17P-201ENST00000384245 107 ntBASIC0.75□□□□□ -2.29
RFC3P40938 RNU6-790P-201ENST00000384479 105 ntBASIC0.75□□□□□ -2.29
RFC3P40938 RNU6-18P-201ENST00000384527 107 ntBASIC0.75□□□□□ -2.29
RFC3P40938 RNU11-5P-201ENST00000391216 129 ntBASIC0.75□□□□□ -2.29
RFC3P40938 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.75□□□□□ -2.29
RFC3P40938 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
RFC3P40938 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.75□□□□□ -2.29
RFC3P40938 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
RFC3P40938 AC007834.2-201ENST00000536310 343 ntBASIC0.75□□□□□ -2.29
RFC3P40938 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.75□□□□□ -2.29
RFC3P40938 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
RFC3P40938 AC006435.5-201ENST00000624486 112 ntBASIC0.75□□□□□ -2.29
RFC3P40938 Y_RNA.151-201ENST00000363566 112 ntBASIC0.74□□□□□ -2.29
RFC3P40938 RNU6-1085P-201ENST00000363576 107 ntBASIC0.74□□□□□ -2.29
RFC3P40938 RNU6-280P-201ENST00000364145 104 ntBASIC0.74□□□□□ -2.29
RFC3P40938 Y_RNA.359-201ENST00000365498 102 ntBASIC0.74□□□□□ -2.29
RFC3P40938 RNU6-793P-201ENST00000384233 104 ntBASIC0.74□□□□□ -2.29
RFC3P40938 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
RFC3P40938 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RFC3P40938 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.74□□□□□ -2.29
RFC3P40938 AC114482.1-201ENST00000418010 247 ntBASIC0.74□□□□□ -2.29
RFC3P40938 ERLEC1P1-201ENST00000433806 578 ntBASIC0.74□□□□□ -2.29
RFC3P40938 DAP3P1-201ENST00000441522 278 ntBASIC0.74□□□□□ -2.29
RFC3P40938 STAG3L5P-204ENST00000443759 179 ntBASIC0.74□□□□□ -2.29
RFC3P40938 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.74□□□□□ -2.29
RFC3P40938 PCMTD1P1-201ENST00000455560 355 ntBASIC0.74□□□□□ -2.29
RFC3P40938 TPT1P7-201ENST00000458300 517 ntBASIC0.74□□□□□ -2.29
RFC3P40938 AC091179.3-201ENST00000474761 144 ntBASIC0.74□□□□□ -2.29
RFC3P40938 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.74□□□□□ -2.29
RFC3P40938 AC010424.1-201ENST00000506336 297 ntBASIC0.74□□□□□ -2.29
RFC3P40938 AL590705.4-201ENST00000532209 134 ntBASIC0.74□□□□□ -2.29
RFC3P40938 MIR4778-201ENST00000577635 80 ntBASIC0.74□□□□□ -2.29
RFC3P40938 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
RFC3P40938 MIR4438-201ENST00000585271 93 ntBASIC0.74□□□□□ -2.29
RFC3P40938 AC063944.3-201ENST00000609969 533 ntBASIC0.74□□□□□ -2.29
RFC3P40938 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.74□□□□□ -2.29
RFC3P40938 AC068137.4-201ENST00000638485 296 ntBASIC0.74□□□□□ -2.29
RFC3P40938 Y_RNA.77-201ENST00000362962 107 ntBASIC0.73□□□□□ -2.29
RFC3P40938 Y_RNA.100-201ENST00000363141 102 ntBASIC0.73□□□□□ -2.29
RFC3P40938 Y_RNA.124-201ENST00000363339 93 ntBASIC0.73□□□□□ -2.29
RFC3P40938 RNU6-727P-201ENST00000363592 107 ntBASIC0.73□□□□□ -2.29
RFC3P40938 RNU5F-3P-201ENST00000363767 117 ntBASIC0.73□□□□□ -2.29
RFC3P40938 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
RFC3P40938 SNORA80D-201ENST00000384488 135 ntBASIC0.73□□□□□ -2.29
RFC3P40938 RNU6-541P-201ENST00000384709 110 ntBASIC0.73□□□□□ -2.29
RFC3P40938 RNU6-159P-201ENST00000391080 106 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AF228730.1-201ENST00000397972 663 ntBASIC0.73□□□□□ -2.29
RFC3P40938 MRPS10P1-201ENST00000448483 130 ntBASIC0.73□□□□□ -2.29
RFC3P40938 SNORD65B-201ENST00000459126 73 ntBASIC0.73□□□□□ -2.29
RFC3P40938 RNU6-1132P-201ENST00000459214 107 ntBASIC0.73□□□□□ -2.29
RFC3P40938 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
RFC3P40938 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.73□□□□□ -2.29
RFC3P40938 RNU6-322P-201ENST00000516010 103 ntBASIC0.73□□□□□ -2.29
RFC3P40938 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
RFC3P40938 APOOP3-201ENST00000536787 586 ntBASIC0.73□□□□□ -2.29
RFC3P40938 OSBPL9P5-201ENST00000542581 171 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AC006362.1-201ENST00000567392 174 ntBASIC0.73□□□□□ -2.29
RFC3P40938 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
RFC3P40938 PIGPP4-201ENST00000584447 307 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AC080078.2-201ENST00000603766 501 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AL357312.1-201ENST00000603879 298 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AC078883.4-201ENST00000623218 367 ntBASIC0.73□□□□□ -2.29
RFC3P40938 MIR6863-201ENST00000636112 90 ntBASIC0.73□□□□□ -2.29
RFC3P40938 AC090582.1-201ENST00000636321 199 ntBASIC0.73□□□□□ -2.29
RFC3P40938 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.73□□□□□ -2.29
RFC3P40938 ELL2P3-201ENST00000457883 1602 ntBASIC0.72□□□□□ -2.29
RFC3P40938 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RFC3P40938 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
RFC3P40938 RNU6-424P-201ENST00000384367 105 ntBASIC0.72□□□□□ -2.29
RFC3P40938 DEFB108C-201ENST00000400154 252 ntBASIC0.72□□□□□ -2.29
RFC3P40938 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
RFC3P40938 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.72□□□□□ -2.29
RFC3P40938 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
RFC3P40938 MTND4P18-201ENST00000447010 465 ntBASIC0.72□□□□□ -2.29
RFC3P40938 RNU6-917P-201ENST00000516294 104 ntBASIC0.72□□□□□ -2.29
RFC3P40938 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.72□□□□□ -2.29
RFC3P40938 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.72□□□□□ -2.29
RFC3P40938 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.72□□□□□ -2.29
RFC3P40938 POLR3GP2-201ENST00000588366 668 ntBASIC0.72□□□□□ -2.29
RFC3P40938 AC009248.2-201ENST00000619826 254 ntBASIC0.72□□□□□ -2.29
RFC3P40938 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.72□□□□□ -2.29
RFC3P40938 AC068137.3-201ENST00000639191 341 ntBASIC0.72□□□□□ -2.29
RFC3P40938 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RFC3P40938 SNORA2.2-201ENST00000365473 135 ntBASIC0.71□□□□□ -2.3
RFC3P40938 RNU6-95P-201ENST00000384697 107 ntBASIC0.71□□□□□ -2.3
RFC3P40938 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
RFC3P40938 RNU6-1068P-201ENST00000410958 103 ntBASIC0.71□□□□□ -2.3
RFC3P40938 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
RFC3P40938 AL445305.1-201ENST00000432577 575 ntBASIC0.71□□□□□ -2.3
RFC3P40938 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms