Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.29□□□□□ -2.2
XRCC1P18887 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 AL163195.1-201ENST00000496941 348 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNU6-358P-201ENST00000516564 75 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNU6-1016P-201ENST00000516689 94 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 AP003033.1-201ENST00000527244 415 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 AC090617.3-201ENST00000573670 475 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 MIR4742-201ENST00000581069 85 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNU6-727P-201ENST00000363592 107 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RNU6-1059P-201ENST00000363752 98 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RNU6-281P-201ENST00000384212 103 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RNU6-192P-201ENST00000391253 100 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR548K-201ENST00000408406 116 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC1P18887 USP9YP16-201ENST00000430287 407 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MTND3P23-201ENST00000431980 347 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC1P18887 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 FGF7P6-202ENST00000451282 293 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 USP9YP23-201ENST00000455085 407 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 RPS26P45-201ENST00000471748 340 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC103851.1-201ENST00000506833 274 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC026782.1-201ENST00000512952 449 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC046134.1-201ENST00000514454 666 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 Y_RNA.683-201ENST00000516508 93 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC1P18887 AK6P2-201ENST00000549020 471 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR5701-3-201ENST00000578890 82 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR5701-1-201ENST00000585138 82 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC011712.1-201ENST00000588959 234 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC060780.3-201ENST00000589464 80 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AL355802.3-201ENST00000607571 545 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR5701-2-201ENST00000615634 82 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC006435.5-201ENST00000624486 112 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 AC027514.1-201ENST00000588561 1603 ntBASIC1.28□□□□□ -2.2
XRCC1P18887 SNORA33-201ENST00000363664 130 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 Y_RNA.184-201ENST00000363884 108 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 RNU6-700P-201ENST00000391043 107 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 MIR190B-201ENST00000401119 79 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 TOMM22P2-201ENST00000430735 237 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 MTND1P4-201ENST00000435196 415 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 MTND4P18-201ENST00000447010 465 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 AC107399.1-201ENST00000451226 265 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 CBX3P8-201ENST00000532412 525 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.27□□□□□ -2.21
XRCC1P18887 APOOP3-201ENST00000536787 586 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 AC015688.6-201ENST00000577737 104 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 MIR5695-201ENST00000579717 85 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 MIR3684-201ENST00000579779 74 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 AC080078.2-201ENST00000603766 501 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 U6.73-201ENST00000619194 103 ntBASIC1.27□□□□□ -2.21
XRCC1P18887 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
XRCC1P18887 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 Y_RNA.482-201ENST00000384377 111 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 RNU6-1050P-201ENST00000410388 107 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 MTCYBP10-201ENST00000424905 650 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AL445305.1-201ENST00000432577 575 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 UBE2V1P7-201ENST00000446395 340 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 RNU7-99P-201ENST00000516271 62 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 Y_RNA.708-201ENST00000516950 96 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.26□□□□□ -2.21
XRCC1P18887 AC004584.2-201ENST00000570407 410 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.26□□□□□ -2.21
XRCC1P18887 MZT1P2-201ENST00000604387 248 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.26□□□□□ -2.21
XRCC1P18887 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 AC095038.3-201ENST00000634439 195 ntBASIC1.26□□□□□ -2.21
XRCC1P18887 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
XRCC1P18887 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
XRCC1P18887 RNU6-1123P-201ENST00000362347 106 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 Y_RNA.106-201ENST00000363189 100 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 SNORA4.2-201ENST00000365313 147 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 Y_RNA.364-201ENST00000365532 101 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RPL21P1-201ENST00000399532 476 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RPS3AP52-201ENST00000435639 297 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU7-34P-201ENST00000459394 64 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 RNU6-307P-201ENST00000516743 106 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 AC093023.1-201ENST00000547375 507 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 AC005899.2-201ENST00000584353 90 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 AL050343.2-201ENST00000607338 280 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms