Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR3674-201ENST00000636576 68 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AL159152.1-201ENST00000635019 2587 ntBASIC2.09□□□□□ -2.07
PCNAP12004 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCNAP12004 MIR449A-201ENST00000362113 91 ntBASIC2.08□□□□□ -2.08
PCNAP12004 Y_RNA.143-201ENST00000363520 106 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNU6-1160P-201ENST00000384546 104 ntBASIC2.08□□□□□ -2.08
PCNAP12004 Y_RNA.551-201ENST00000384661 102 ntBASIC2.08□□□□□ -2.08
PCNAP12004 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
PCNAP12004 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCNAP12004 MIR1252-201ENST00000408861 65 ntBASIC2.08□□□□□ -2.08
PCNAP12004 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCNAP12004 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.08□□□□□ -2.08
PCNAP12004 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
PCNAP12004 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
PCNAP12004 AC074290.1-201ENST00000448883 135 ntBASIC2.08□□□□□ -2.08
PCNAP12004 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNU6-221P-201ENST00000459541 99 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNU6-1041P-201ENST00000516254 102 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
PCNAP12004 AC131281.1-201ENST00000522984 164 ntBASIC2.08□□□□□ -2.08
PCNAP12004 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
PCNAP12004 AL360085.1-201ENST00000604713 532 ntBASIC2.08□□□□□ -2.08
PCNAP12004 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.08□□□□□ -2.08
PCNAP12004 AC004467.1-201ENST00000615678 330 ntBASIC2.08□□□□□ -2.08
PCNAP12004 AC022513.1-201ENST00000624512 117 ntBASIC2.08□□□□□ -2.08
PCNAP12004 MTND5P6-201ENST00000422338 1798 ntBASIC2.08□□□□□ -2.08
PCNAP12004 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
PCNAP12004 Y_RNA.101-201ENST00000363154 102 ntBASIC2.07□□□□□ -2.08
PCNAP12004 Y_RNA.105-201ENST00000363182 111 ntBASIC2.07□□□□□ -2.08
PCNAP12004 Y_RNA.210-201ENST00000364161 110 ntBASIC2.07□□□□□ -2.08
PCNAP12004 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.07□□□□□ -2.08
PCNAP12004 RNU6-937P-201ENST00000384325 106 ntBASIC2.07□□□□□ -2.08
PCNAP12004 RNU11-3P-201ENST00000391111 133 ntBASIC2.07□□□□□ -2.08
PCNAP12004 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
PCNAP12004 TOMM22P2-201ENST00000430735 237 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AC005002.2-201ENST00000438228 269 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AL118496.2-201ENST00000448300 230 ntBASIC2.07□□□□□ -2.08
PCNAP12004 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
PCNAP12004 MTATP8P1-201ENST00000467115 207 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.07□□□□□ -2.08
PCNAP12004 RNU6-897P-201ENST00000517135 105 ntBASIC2.07□□□□□ -2.08
PCNAP12004 Y_RNA.721-201ENST00000517207 102 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AC027419.1-201ENST00000522976 328 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
PCNAP12004 Y_RNA.772-201ENST00000606692 102 ntBASIC2.07□□□□□ -2.08
PCNAP12004 AC010205.1-201ENST00000616668 449 ntBASIC2.07□□□□□ -2.08
PCNAP12004 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCNAP12004 Y_RNA.26-201ENST00000362539 101 ntBASIC2.06□□□□□ -2.08
PCNAP12004 RNU6-806P-201ENST00000365147 105 ntBASIC2.06□□□□□ -2.08
PCNAP12004 Y_RNA.439-201ENST00000384119 94 ntBASIC2.06□□□□□ -2.08
PCNAP12004 DPH3P2-201ENST00000422618 250 ntBASIC2.06□□□□□ -2.08
PCNAP12004 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.06□□□□□ -2.08
PCNAP12004 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
PCNAP12004 RNU1-131P-201ENST00000458943 161 ntBASIC2.06□□□□□ -2.08
PCNAP12004 UBE2DNL-203ENST00000474922 222 ntBASIC2.06□□□□□ -2.08
PCNAP12004 AC010655.3-201ENST00000478818 450 ntBASIC2.06□□□□□ -2.08
PCNAP12004 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.06□□□□□ -2.08
PCNAP12004 AC136932.1-201ENST00000574771 208 ntBASIC2.06□□□□□ -2.08
PCNAP12004 AC005176.2-201ENST00000596933 147 ntBASIC2.06□□□□□ -2.08
PCNAP12004 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.06□□□□□ -2.08
PCNAP12004 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.06□□□□□ -2.08
PCNAP12004 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.06□□□□□ -2.08
PCNAP12004 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCNAP12004 Y_RNA.111-201ENST00000363248 100 ntBASIC2.05□□□□□ -2.08
PCNAP12004 SNORA72.2-201ENST00000365028 127 ntBASIC2.05□□□□□ -2.08
PCNAP12004 Y_RNA.422-201ENST00000384054 114 ntBASIC2.05□□□□□ -2.08
PCNAP12004 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RNA5SP475-201ENST00000410568 110 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RNA5SP508-201ENST00000411327 119 ntBASIC2.05□□□□□ -2.08
PCNAP12004 ELOCP20-201ENST00000422460 345 ntBASIC2.05□□□□□ -2.08
PCNAP12004 MTND2P23-201ENST00000422990 651 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
PCNAP12004 AC011406.1-201ENST00000512440 370 ntBASIC2.05□□□□□ -2.08
PCNAP12004 RNU2-34P-201ENST00000516534 121 ntBASIC2.05□□□□□ -2.08
PCNAP12004 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
PCNAP12004 AC008737.2-201ENST00000599446 118 ntBASIC2.05□□□□□ -2.08
PCNAP12004 AC116312.1-201ENST00000606841 314 ntBASIC2.05□□□□□ -2.08
PCNAP12004 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
PCNAP12004 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCNAP12004 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCNAP12004 SNORA33-201ENST00000363664 130 ntBASIC2.04□□□□□ -2.08
PCNAP12004 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
PCNAP12004 RNU6-738P-201ENST00000384531 106 ntBASIC2.04□□□□□ -2.08
PCNAP12004 RNU4-30P-201ENST00000410245 143 ntBASIC2.04□□□□□ -2.08
PCNAP12004 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.04□□□□□ -2.08
PCNAP12004 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
PCNAP12004 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
PCNAP12004 YWHAEP4-201ENST00000505390 198 ntBASIC2.04□□□□□ -2.08
PCNAP12004 MRPS35P2-201ENST00000508242 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 Y_RNA.720-201ENST00000517166 92 ntBASIC2.04□□□□□ -2.08
PCNAP12004 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.15-201ENST00000611544 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.16-201ENST00000613119 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.12-201ENST00000613778 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.20-201ENST00000613956 192 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms