Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC092881.1-201ENST00000638218 2733 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 SNORD32B-201ENST00000364460 84 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 RNU6-200P-201ENST00000364743 107 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 SNORD58.1-201ENST00000391313 66 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.84□□□□□ -1.95
SNRPA1P09661 RPL30P4-201ENST00000429309 333 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 MTCO1P5-201ENST00000433573 344 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRPA1P09661 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.84□□□□□ -1.95
SNRPA1P09661 MIR449C-201ENST00000516047 92 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 RNU4-71P-201ENST00000516258 113 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 RNU6-155P-201ENST00000516347 100 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 RNA5SP200-201ENST00000516360 103 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRPA1P09661 RPL21P9-201ENST00000556149 474 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 MIR3145-201ENST00000580727 82 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRPA1P09661 AL590240.4-201ENST00000616908 390 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 AC068205.3-201ENST00000636385 468 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 MIR219B-201ENST00000637023 88 ntBASIC2.84□□□□□ -1.95
SNRPA1P09661 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNRPA1P09661 MIR410-201ENST00000362222 80 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 Y_RNA.76-201ENST00000362931 109 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU6-740P-201ENST00000364734 105 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU1-51P-201ENST00000365345 176 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU6-514P-201ENST00000384208 107 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 SNORA67.3-201ENST00000384366 140 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU6-1274P-201ENST00000384557 107 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 MIR29B2-201ENST00000385055 81 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 AL023284.1-201ENST00000403956 276 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNA5SP475-201ENST00000410568 110 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 RNU6-1199P-201ENST00000411249 104 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 AC009310.1-201ENST00000414414 451 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRPA1P09661 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRPA1P09661 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRPA1P09661 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRPA1P09661 MIR3199-1-201ENST00000582434 88 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRPA1P09661 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRPA1P09661 AC009831.4-201ENST00000620744 325 ntBASIC2.83□□□□□ -1.96
SNRPA1P09661 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNRPA1P09661 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNRPA1P09661 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRPA1P09661 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRPA1P09661 Y_RNA.117-201ENST00000363294 101 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RNU6-944P-201ENST00000364023 107 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 Y_RNA.274-201ENST00000364714 101 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RNU6-1264P-201ENST00000383891 107 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RNU6-1310P-201ENST00000384153 107 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 SNORA11.4-201ENST00000408823 129 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RNU6-651P-201ENST00000411040 105 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RNU2-64P-201ENST00000411315 191 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRPA1P09661 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRPA1P09661 AC091959.1-201ENST00000495857 238 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 AL713866.2-201ENST00000603579 219 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
SNRPA1P09661 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNRPA1P09661 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRPA1P09661 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNRPA1P09661 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.81□□□□□ -1.96
SNRPA1P09661 Y_RNA.136-201ENST00000363444 102 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 RNY1-201ENST00000364228 113 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 RNU6-454P-201ENST00000364292 107 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 SNORA67.2-201ENST00000384300 149 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 RNU2-54P-201ENST00000410299 190 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRPA1P09661 AC090515.1-201ENST00000465295 476 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 SCARNA16.3-201ENST00000516595 184 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 RNU6-1098P-201ENST00000516772 96 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.81□□□□□ -1.96
SNRPA1P09661 MIR4524B-201ENST00000581569 115 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 AC090616.3-201ENST00000582184 217 ntBASIC2.81□□□□□ -1.96
SNRPA1P09661 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNRPA1P09661 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
SNRPA1P09661 RNU4-80P-201ENST00000363200 141 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 MIR1298-201ENST00000408783 112 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 AL139156.1-201ENST00000412785 841 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRPA1P09661 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRPA1P09661 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRPA1P09661 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRPA1P09661 RNU6-237P-201ENST00000515985 71 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 RNU5F-4P-201ENST00000516581 114 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRPA1P09661 MIR3117-201ENST00000584034 78 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 AL162424.1-201ENST00000602325 221 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 DEFB117-201ENST00000602356 141 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 MIR6132-201ENST00000622083 109 ntBASIC2.8□□□□□ -1.96
SNRPA1P09661 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
SNRPA1P09661 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNRPA1P09661 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRPA1P09661 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms