Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AC091021.1-201ENST00000468051 388 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AF186996.7-201ENST00000492781 209 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 SNORA74.3-201ENST00000517108 154 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AC120024.3-201ENST00000603167 156 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC253576.2-201ENST00000618815 580 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 RMST_7.1-201ENST00000621935 268 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 snoZ196.1-201ENST00000625269 89 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 RNU6-187P-201ENST00000384139 106 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 RNU2-62P-201ENST00000410868 191 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.48□□□□□ -2.49
SPTA1P02549 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AL139824.2-201ENST00000458731 1095 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 SUMO2P5-201ENST00000506790 245 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPTA1P02549 RNU7-129P-201ENST00000516128 62 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC026616.1-201ENST00000523157 525 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC104383.1-201ENST00000530297 370 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC023442.1-201ENST00000531247 422 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.48□□□□□ -2.49
SPTA1P02549 AC133485.4-201ENST00000561835 220 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 MIR4778-201ENST00000577635 80 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 MIR3146-201ENST00000580367 79 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC008521.1-201ENST00000587471 187 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC022893.3-201ENST00000607665 437 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 MIR6740-201ENST00000618268 113 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AL162726.3-218ENST00000636401 95 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AC092104.1-201ENST00000497346 1441 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 SNORA1B-201ENST00000362535 133 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 MTCO2P33-201ENST00000402100 465 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AL663109.1-201ENST00000411498 844 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 MTCYBP39-201ENST00000437562 491 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 HSFY5P-201ENST00000453726 309 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
SPTA1P02549 RNU7-156P-201ENST00000517214 74 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.49□□□□□ -2.49
SPTA1P02549 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.49□□□□□ -2.49
SPTA1P02549 MIR4263-201ENST00000584745 83 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC009994.1-201ENST00000606889 253 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC097478.2-201ENST00000610572 514 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC006157.1-201ENST00000611750 366 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AL359697.1-201ENST00000624879 587 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 MTND5P42-201ENST00000637720 498 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 MIR501-201ENST00000390204 84 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 RNU6-440P-201ENST00000390882 105 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC092809.3-201ENST00000415453 231 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.49□□□□□ -2.49
SPTA1P02549 snoU13.2-201ENST00000459201 104 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC010468.3-201ENST00000508225 458 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.49□□□□□ -2.49
SPTA1P02549 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.49□□□□□ -2.49
SPTA1P02549 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 AC120349.2-201ENST00000625002 298 ntBASIC-0.49□□□□□ -2.49
SPTA1P02549 RNU6-378P-201ENST00000384324 107 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU2-39P-201ENST00000410604 198 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 TIMM9P2-201ENST00000419324 266 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPTA1P02549 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.5□□□□□ -2.49
SPTA1P02549 RPL39P36-201ENST00000490784 156 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SPTA1P02549 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.5□□□□□ -2.49
SPTA1P02549 RN7SKP19-201ENST00000516016 252 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU2-34P-201ENST00000516534 121 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 MTND1P36-201ENST00000522384 936 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AC087883.1-201ENST00000551882 391 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPTA1P02549 MIR3912-201ENST00000577566 105 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AP002360.4-201ENST00000606980 481 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 U6.42-201ENST00000618440 107 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 MIR4251-201ENST00000635819 61 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU4-21P-201ENST00000362802 126 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 SNORA33-201ENST00000363664 130 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNA5SP201-201ENST00000410316 124 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.5□□□□□ -2.49
SPTA1P02549 PIGPP3-201ENST00000425307 415 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPTA1P02549 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPTA1P02549 MTND3P5-201ENST00000512798 333 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 MIR5706-201ENST00000579841 80 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 MIR3165-201ENST00000579874 75 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 DEFB131E-202ENST00000602581 683 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 RNU1-29P-201ENST00000606574 126 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 AC006504.8-201ENST00000621046 635 ntBASIC-0.5□□□□□ -2.49
SPTA1P02549 ZNF204P-201ENST00000416749 2397 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RNU6-527P-201ENST00000363425 104 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms