Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-1183P-201ENST00000517054 60 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 MTND5P41-201ENST00000517498 206 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 AC091144.1-201ENST00000519573 138 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 AC019159.1-201ENST00000605094 187 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 MTND5P35-201ENST00000557537 1720 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AL359854.1-201ENST00000614203 1594 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RNU6-335P-201ENST00000364563 113 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RNU6-20P-201ENST00000384106 107 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 SNORA29-201ENST00000384183 140 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RNU6-662P-201ENST00000384253 104 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RNU6-804P-201ENST00000384286 107 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RPS4XP3-201ENST00000398541 413 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AC099548.1-201ENST00000421443 426 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 RPS15AP7-201ENST00000439294 405 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.05□□□□□ -2.08
COL2A1P02458 MRPS10P1-201ENST00000448483 130 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
COL2A1P02458 AC087477.1-201ENST00000465747 340 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AP001025.1-201ENST00000486139 332 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 LINC00933-203ENST00000559812 219 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.05□□□□□ -2.08
COL2A1P02458 MIR3199-1-201ENST00000582434 88 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.05□□□□□ -2.08
COL2A1P02458 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.05□□□□□ -2.08
COL2A1P02458 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
COL2A1P02458 RNU4-90P-201ENST00000362773 141 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.82-201ENST00000363000 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.92-201ENST00000363043 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 SNORD81.1-201ENST00000363064 77 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNU6-884P-201ENST00000363889 107 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNY1-201ENST00000364228 113 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.235-201ENST00000364412 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNU4-9P-201ENST00000364951 139 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.306-201ENST00000365015 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.308-201ENST00000365043 101 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.312-201ENST00000365089 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.322-201ENST00000365151 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNY4P28-201ENST00000365281 93 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNU6-17P-201ENST00000384245 107 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNU6-18P-201ENST00000384527 107 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.569-201ENST00000384749 103 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 MIR186-201ENST00000384988 86 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 SNORD58.1-201ENST00000391313 66 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC138623.1-201ENST00000418060 216 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC098614.2-201ENST00000426040 255 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC024067.1-201ENST00000426199 223 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RPL21P66-201ENST00000426566 466 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 EIF1P2-201ENST00000428233 350 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC005002.2-201ENST00000438228 269 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 NDUFB4P10-201ENST00000452541 359 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.650-201ENST00000459002 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RPL30P12-201ENST00000474666 353 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 MED28P2-201ENST00000475771 317 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RAC1P5-201ENST00000512182 576 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 SNORA31.6-201ENST00000516241 130 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 RNU6-966P-201ENST00000516479 104 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 SNORA25.14-201ENST00000516481 132 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 SNORD59.2-201ENST00000516873 68 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.777-201ENST00000516982 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.04□□□□□ -2.08
COL2A1P02458 AC055872.1-201ENST00000570978 278 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.04□□□□□ -2.08
COL2A1P02458 MIR3145-201ENST00000580727 82 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.771-201ENST00000598668 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 Y_RNA.789-201ENST00000622480 102 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 AC007785.2-201ENST00000598627 1916 ntBASIC2.04□□□□□ -2.08
COL2A1P02458 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL2A1P02458 RNU6-942P-201ENST00000363002 107 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 Y_RNA.170-201ENST00000363746 110 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 RNU6-290P-201ENST00000365212 101 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 Y_RNA.446-201ENST00000384178 104 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 RNU6-21P-201ENST00000384710 107 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 AL133475.1-201ENST00000404414 305 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 Y_RNA.590-201ENST00000410140 107 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 RNU6-1001P-201ENST00000411265 100 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 NDUFB4P7-201ENST00000423198 363 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 AC098831.1-201ENST00000440661 216 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 RNU6-711P-201ENST00000517255 106 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.03□□□□□ -2.08
COL2A1P02458 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.03□□□□□ -2.08
COL2A1P02458 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 U2.14-201ENST00000615943 113 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL2A1P02458 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL2A1P02458 BX322639.1-202ENST00000423987 2213 ntBASIC2.03□□□□□ -2.08
COL2A1P02458 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL2A1P02458 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL2A1P02458 RNU6-1181P-201ENST00000384191 106 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 FTH1P15-201ENST00000406984 280 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.02□□□□□ -2.09
COL2A1P02458 AL392103.1-201ENST00000447000 198 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 SEPT14P8-201ENST00000508026 178 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 RNA5SP272-201ENST00000516095 111 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 RNU6-928P-201ENST00000516876 104 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 RNU2-31P-201ENST00000516954 155 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms