Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MTND4P18-201ENST00000447010 465 ntBASIC1.17□□□□□ -2.22
MBD3O95983 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
MBD3O95983 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.17□□□□□ -2.22
MBD3O95983 AC093852.1-201ENST00000503587 266 ntBASIC1.17□□□□□ -2.22
MBD3O95983 RNU6-720P-201ENST00000516363 108 ntBASIC1.17□□□□□ -2.22
MBD3O95983 Y_RNA.676-201ENST00000516393 96 ntBASIC1.17□□□□□ -2.22
MBD3O95983 RNU6-1314P-201ENST00000517139 104 ntBASIC1.17□□□□□ -2.22
MBD3O95983 MIR3942-201ENST00000585264 109 ntBASIC1.17□□□□□ -2.22
MBD3O95983 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
MBD3O95983 AC010999.1-201ENST00000611856 324 ntBASIC1.17□□□□□ -2.22
MBD3O95983 AC090617.10-201ENST00000624308 134 ntBASIC1.17□□□□□ -2.22
MBD3O95983 Y_RNA.89-201ENST00000363031 102 ntBASIC1.16□□□□□ -2.22
MBD3O95983 RNU4-75P-201ENST00000364621 146 ntBASIC1.16□□□□□ -2.22
MBD3O95983 Y_RNA.415-201ENST00000384012 112 ntBASIC1.16□□□□□ -2.22
MBD3O95983 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
MBD3O95983 Y_RNA.450-201ENST00000384198 113 ntBASIC1.16□□□□□ -2.22
MBD3O95983 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
MBD3O95983 AL034345.1-201ENST00000407768 123 ntBASIC1.16□□□□□ -2.22
MBD3O95983 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
MBD3O95983 MTND1P17-201ENST00000448961 204 ntBASIC1.16□□□□□ -2.22
MBD3O95983 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.16□□□□□ -2.22
MBD3O95983 RPS29P25-201ENST00000481709 171 ntBASIC1.16□□□□□ -2.22
MBD3O95983 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.16□□□□□ -2.22
MBD3O95983 AC010598.1-201ENST00000510378 103 ntBASIC1.16□□□□□ -2.22
MBD3O95983 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
MBD3O95983 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
MBD3O95983 AL121579.1-201ENST00000555129 305 ntBASIC1.16□□□□□ -2.22
MBD3O95983 FRG2DP-202ENST00000566967 323 ntBASIC1.16□□□□□ -2.22
MBD3O95983 snoU13.31-201ENST00000607291 104 ntBASIC1.16□□□□□ -2.22
MBD3O95983 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.16□□□□□ -2.22
MBD3O95983 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.16□□□□□ -2.22
MBD3O95983 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MBD3O95983 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MBD3O95983 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
MBD3O95983 RNU6-281P-201ENST00000384212 103 ntBASIC1.15□□□□□ -2.23
MBD3O95983 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.15□□□□□ -2.23
MBD3O95983 DLGAP5P1-201ENST00000430307 464 ntBASIC1.15□□□□□ -2.23
MBD3O95983 MTND4LP16-201ENST00000440828 295 ntBASIC1.15□□□□□ -2.23
MBD3O95983 SNORD5.1-201ENST00000458800 75 ntBASIC1.15□□□□□ -2.23
MBD3O95983 SNORD65B-201ENST00000459126 73 ntBASIC1.15□□□□□ -2.23
MBD3O95983 RNU6-1114P-201ENST00000516022 107 ntBASIC1.15□□□□□ -2.23
MBD3O95983 RNU6-566P-201ENST00000516790 107 ntBASIC1.15□□□□□ -2.23
MBD3O95983 APOOP3-201ENST00000536787 586 ntBASIC1.15□□□□□ -2.23
MBD3O95983 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.15□□□□□ -2.23
MBD3O95983 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
MBD3O95983 Y_RNA.436-201ENST00000384097 102 ntBASIC1.14□□□□□ -2.23
MBD3O95983 RNU6-831P-201ENST00000384548 107 ntBASIC1.14□□□□□ -2.23
MBD3O95983 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
MBD3O95983 Y_RNA.595-201ENST00000410403 105 ntBASIC1.14□□□□□ -2.23
MBD3O95983 RPL30P16-201ENST00000419341 429 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AC010154.1-201ENST00000425857 269 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AC245047.3-201ENST00000429428 127 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AP000870.1-201ENST00000472927 406 ntBASIC1.14□□□□□ -2.23
MBD3O95983 Y_RNA.683-201ENST00000516508 93 ntBASIC1.14□□□□□ -2.23
MBD3O95983 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.14□□□□□ -2.23
MBD3O95983 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.14□□□□□ -2.23
MBD3O95983 UBL5P4-201ENST00000562584 236 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AL513534.2-201ENST00000603836 250 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AC100812.1-201ENST00000607622 580 ntBASIC1.14□□□□□ -2.23
MBD3O95983 AC099654.5-201ENST00000636479 350 ntBASIC1.14□□□□□ -2.23
MBD3O95983 RNY1P10-201ENST00000363268 113 ntBASIC1.13□□□□□ -2.23
MBD3O95983 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.184-201ENST00000363884 108 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.405-201ENST00000383979 100 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.451-201ENST00000384200 100 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.524-201ENST00000384564 100 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.533-201ENST00000384596 114 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Y_RNA.561-201ENST00000384694 100 ntBASIC1.13□□□□□ -2.23
MBD3O95983 MIR562-201ENST00000384894 95 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RNU6-1186P-201ENST00000410429 97 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RPL37P10-201ENST00000412884 288 ntBASIC1.13□□□□□ -2.23
MBD3O95983 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.13□□□□□ -2.23
MBD3O95983 AL603825.1-201ENST00000438481 80 ntBASIC1.13□□□□□ -2.23
MBD3O95983 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
MBD3O95983 SNORD116-28-201ENST00000516123 91 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RNU6-1088P-201ENST00000516850 104 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RNU1-54P-201ENST00000517181 120 ntBASIC1.13□□□□□ -2.23
MBD3O95983 SUMO2P16-201ENST00000519475 264 ntBASIC1.13□□□□□ -2.23
MBD3O95983 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.13□□□□□ -2.23
MBD3O95983 AC090617.3-201ENST00000573670 475 ntBASIC1.13□□□□□ -2.23
MBD3O95983 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
MBD3O95983 SNORA28-201ENST00000606769 126 ntBASIC1.13□□□□□ -2.23
MBD3O95983 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
MBD3O95983 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
MBD3O95983 AC073349.3-201ENST00000617616 186 ntBASIC1.13□□□□□ -2.23
MBD3O95983 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
MBD3O95983 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.13□□□□□ -2.23
MBD3O95983 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
MBD3O95983 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
MBD3O95983 Y_RNA.301-201ENST00000364990 103 ntBASIC1.12□□□□□ -2.23
MBD3O95983 Y_RNA.554-201ENST00000384672 102 ntBASIC1.12□□□□□ -2.23
MBD3O95983 MTCO3P19-201ENST00000415864 321 ntBASIC1.12□□□□□ -2.23
MBD3O95983 AC005002.2-201ENST00000438228 269 ntBASIC1.12□□□□□ -2.23
MBD3O95983 MRPS10P1-201ENST00000448483 130 ntBASIC1.12□□□□□ -2.23
MBD3O95983 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.12□□□□□ -2.23
MBD3O95983 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
MBD3O95983 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
MBD3O95983 AC046134.1-201ENST00000514454 666 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms