Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 Y_RNA.533-201ENST00000384596 114 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CPSF4O95639 SNORA12.1-201ENST00000390873 148 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 AC243428.1-201ENST00000421099 264 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 MTND3P21-201ENST00000433774 331 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 AC093534.1-201ENST00000504977 132 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 RN7SKP88-201ENST00000516847 250 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 RNU6-273P-201ENST00000516937 96 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.74□□□□□ -2.29
CPSF4O95639 AC109635.3-201ENST00000529536 185 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 AL137100.2-201ENST00000555786 315 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 MIR4298-201ENST00000584380 73 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 7SK.8-201ENST00000612110 250 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 7SK.11-201ENST00000615477 250 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
CPSF4O95639 Y_RNA.179-201ENST00000363844 90 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 RNU6-280P-201ENST00000364145 104 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 Y_RNA.402-201ENST00000383972 102 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 Y_RNA.554-201ENST00000384672 102 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 MIR10B-201ENST00000385011 110 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 RNU6-440P-201ENST00000390882 105 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 MRPL42P3-201ENST00000401492 326 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 AC245047.3-201ENST00000429428 127 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CPSF4O95639 AP000870.1-201ENST00000472927 406 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 TRMT112P2-201ENST00000512910 132 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF4O95639 AC022432.1-201ENST00000595739 310 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 MIR8065-201ENST00000620577 100 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 AC068647.2-201ENST00000637380 353 ntBASIC0.73□□□□□ -2.29
CPSF4O95639 RNU6-1266P-201ENST00000362794 105 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-1059P-201ENST00000363752 98 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 Y_RNA.405-201ENST00000383979 100 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 Y_RNA.451-201ENST00000384200 100 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-831P-201ENST00000384548 107 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 Y_RNA.524-201ENST00000384564 100 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 Y_RNA.561-201ENST00000384694 100 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 MIR181A1-201ENST00000385026 110 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-1148P-201ENST00000410992 104 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-373P-201ENST00000411247 98 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC016907.1-201ENST00000419483 435 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4O95639 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF4O95639 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF4O95639 DYNLT3P2-201ENST00000442517 295 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 PGBD4P5-201ENST00000445958 426 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 MTND4P18-201ENST00000447010 465 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF4O95639 SNORD65B-201ENST00000459126 73 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC005840.1-201ENST00000498412 377 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC093303.1-201ENST00000514549 295 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU7-175P-201ENST00000515915 61 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-864P-201ENST00000516256 108 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU7-99P-201ENST00000516271 62 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNU6-1314P-201ENST00000517139 104 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC091144.1-201ENST00000519573 138 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC027419.1-201ENST00000522976 328 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC134698.4-201ENST00000523451 826 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4O95639 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4O95639 AC004584.2-201ENST00000570407 410 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4O95639 MIR4273-201ENST00000582824 84 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 7SK.7-201ENST00000603504 247 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AL021879.1-201ENST00000611756 288 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC015540.1-201ENST00000615828 501 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC099654.5-201ENST00000636479 350 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 AC100810.6-201ENST00000638068 285 ntBASIC0.72□□□□□ -2.29
CPSF4O95639 RNY4P14-201ENST00000363656 96 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 RNU6-596P-201ENST00000365395 98 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 Y_RNA.436-201ENST00000384097 102 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 RNU11-5P-201ENST00000391216 129 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 RPL39P38-201ENST00000467018 153 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AC092991.1-201ENST00000477176 376 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF4O95639 RNU6-1088P-201ENST00000516850 104 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 RNU6-165P-201ENST00000517170 99 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AL590705.4-201ENST00000532209 134 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.71□□□□□ -2.3
CPSF4O95639 MIR5695-201ENST00000579717 85 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 MIR4438-201ENST00000585271 93 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AC010999.1-201ENST00000611856 324 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF4O95639 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
CPSF4O95639 AL391516.1-201ENST00000554380 2449 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 Y_RNA.9-201ENST00000362354 101 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 Y_RNA.48-201ENST00000362710 103 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 Y_RNA.89-201ENST00000363031 102 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 RNU5F-3P-201ENST00000363767 117 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 Y_RNA.184-201ENST00000363884 108 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 RNU6-595P-201ENST00000363944 107 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 RNU6-281P-201ENST00000384212 103 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 AL034345.1-201ENST00000407768 123 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 USP9YP30-201ENST00000430729 455 ntBASIC0.7□□□□□ -2.3
CPSF4O95639 MTND3P23-201ENST00000431980 347 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms