Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC243428.1-201ENST00000421099 264 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 AL589823.1-201ENST00000429577 183 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 MTND4LP16-201ENST00000440828 295 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3AO75631 AP000870.1-201ENST00000472927 406 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 AC105313.1-201ENST00000509121 353 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 RNU7-175P-201ENST00000515915 61 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 RNU6-864P-201ENST00000516256 108 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 AL137100.2-201ENST00000555786 315 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 TPRKBP2-201ENST00000565969 475 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 FRG2DP-202ENST00000566967 323 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 MIR5695-201ENST00000579717 85 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 AC022217.4-201ENST00000604389 163 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 AC021506.2-201ENST00000612354 169 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK3AO75631 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UPK3AO75631 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.3-201ENST00000362331 103 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU6-623P-201ENST00000363143 105 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.179-201ENST00000363844 90 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.295-201ENST00000364918 102 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.405-201ENST00000383979 100 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.451-201ENST00000384200 100 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU6-831P-201ENST00000384548 107 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.524-201ENST00000384564 100 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.561-201ENST00000384694 100 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 Y_RNA.573-201ENST00000384763 105 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU6-1148P-201ENST00000410992 104 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 NDUFB4P10-201ENST00000452541 359 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 SNORA31.10-201ENST00000516482 106 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU6-1088P-201ENST00000516850 104 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 RNU1-54P-201ENST00000517181 120 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 SUMO2P16-201ENST00000519475 264 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 AC027419.1-201ENST00000522976 328 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 AL590705.4-201ENST00000532209 134 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 AC022432.1-201ENST00000595739 310 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK3AO75631 MIR3662-201ENST00000637030 95 ntBASIC1.05□□□□□ -2.24
UPK3AO75631 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UPK3AO75631 ZNF299P-201ENST00000406845 1804 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 RNU5F-3P-201ENST00000363767 117 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 RNU6-1013P-201ENST00000384180 107 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 RNU6-1031P-201ENST00000384773 107 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 MIR10B-201ENST00000385011 110 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 RN7SKP200-201ENST00000410564 320 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 AC245047.3-201ENST00000429428 127 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK3AO75631 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK3AO75631 RNU6-107P-201ENST00000516643 102 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 EIF1P4-201ENST00000572664 335 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 AC093913.1-201ENST00000614178 329 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 MIR6128-201ENST00000615528 109 ntBASIC1.04□□□□□ -2.24
UPK3AO75631 Y_RNA.48-201ENST00000362710 103 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 RNU1-22P-201ENST00000363334 158 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 Y_RNA.157-201ENST00000363638 102 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 Y_RNA.184-201ENST00000363884 108 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 Y_RNA.318-201ENST00000365131 97 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
UPK3AO75631 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 USP9YP30-201ENST00000430729 455 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 AC093303.1-201ENST00000514549 295 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 Y_RNA.673-201ENST00000516306 88 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 RNU6-720P-201ENST00000516363 108 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 RNU6-566P-201ENST00000516790 107 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 APOOP3-201ENST00000536787 586 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.03□□□□□ -2.24
UPK3AO75631 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
UPK3AO75631 AC010999.1-201ENST00000611856 324 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 MIR8070-201ENST00000616510 88 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 U6.73-201ENST00000619194 103 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 MIR8054-201ENST00000620877 86 ntBASIC1.03□□□□□ -2.24
UPK3AO75631 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
UPK3AO75631 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK3AO75631 RNU6-222P-201ENST00000362438 107 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNU6-595P-201ENST00000363944 107 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNU6-596P-201ENST00000365395 98 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 Y_RNA.453-201ENST00000384223 109 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 Y_RNA.516-201ENST00000384541 124 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNU6-440P-201ENST00000390882 105 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 SNORD115-47-201ENST00000391226 86 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 MRPL42P3-201ENST00000401492 326 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AL356776.1-201ENST00000406574 447 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNA5SP118-201ENST00000410385 109 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3AO75631 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3AO75631 USMG5P1-201ENST00000425964 177 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK3AO75631 MTND3P23-201ENST00000431980 347 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 MTND4P18-201ENST00000447010 465 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 MTND1P17-201ENST00000448961 204 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms