Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.650-201ENST00000459002 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.63□□□□□ -1.99
PROM1O43490 AC107393.1-201ENST00000512403 346 ntBASIC2.63□□□□□ -1.99
PROM1O43490 RN7SKP132-201ENST00000516001 208 ntBASIC2.63□□□□□ -1.99
PROM1O43490 RNU6-1098P-201ENST00000516772 96 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.777-201ENST00000516982 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.771-201ENST00000598668 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Z83818.1-201ENST00000603584 150 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.789-201ENST00000622480 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
PROM1O43490 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PROM1O43490 RNU6-1020P-201ENST00000363684 107 ntBASIC2.62□□□□□ -1.99
PROM1O43490 SNORD32B-201ENST00000364460 84 ntBASIC2.62□□□□□ -1.99
PROM1O43490 MIR592-201ENST00000384959 97 ntBASIC2.62□□□□□ -1.99
PROM1O43490 RNU6-1248P-201ENST00000391096 64 ntBASIC2.62□□□□□ -1.99
PROM1O43490 MIR1294-201ENST00000408503 142 ntBASIC2.62□□□□□ -1.99
PROM1O43490 U6atac.2-201ENST00000408644 118 ntBASIC2.62□□□□□ -1.99
PROM1O43490 TOMM22P2-201ENST00000430735 237 ntBASIC2.62□□□□□ -1.99
PROM1O43490 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
PROM1O43490 COX6CP14-201ENST00000469580 174 ntBASIC2.62□□□□□ -1.99
PROM1O43490 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PROM1O43490 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.62□□□□□ -1.99
PROM1O43490 RNU2-12P-201ENST00000517216 168 ntBASIC2.62□□□□□ -1.99
PROM1O43490 CBX3P4-201ENST00000538909 354 ntBASIC2.62□□□□□ -1.99
PROM1O43490 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
PROM1O43490 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
PROM1O43490 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.62□□□□□ -1.99
PROM1O43490 MIR3199-1-201ENST00000582434 88 ntBASIC2.62□□□□□ -1.99
PROM1O43490 MIR4282-201ENST00000583613 67 ntBASIC2.62□□□□□ -1.99
PROM1O43490 RPL17P51-201ENST00000605218 238 ntBASIC2.62□□□□□ -1.99
PROM1O43490 AC073349.3-201ENST00000617616 186 ntBASIC2.62□□□□□ -1.99
PROM1O43490 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.62□□□□□ -1.99
PROM1O43490 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PROM1O43490 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
PROM1O43490 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PROM1O43490 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.61□□□□□ -1.99
PROM1O43490 AC062016.1-201ENST00000355719 319 ntBASIC2.61□□□□□ -1.99
PROM1O43490 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
PROM1O43490 SNORA38-201ENST00000363946 132 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU6-923P-201ENST00000364753 107 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU6-1274P-201ENST00000384557 107 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.61□□□□□ -1.99
PROM1O43490 COX6CP10-201ENST00000416832 224 ntBASIC2.61□□□□□ -1.99
PROM1O43490 BTF3P11-201ENST00000426582 477 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RPL30P4-201ENST00000429309 333 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.61□□□□□ -1.99
PROM1O43490 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU7-14P-201ENST00000459331 62 ntBASIC2.61□□□□□ -1.99
PROM1O43490 SRIP1-201ENST00000489235 288 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU6-436P-201ENST00000516171 114 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU6-586P-201ENST00000517265 104 ntBASIC2.61□□□□□ -1.99
PROM1O43490 RNU1-104P-201ENST00000517280 175 ntBASIC2.61□□□□□ -1.99
PROM1O43490 AC087441.2-201ENST00000529141 262 ntBASIC2.61□□□□□ -1.99
PROM1O43490 AC069294.1-201ENST00000608397 350 ntBASIC2.61□□□□□ -1.99
PROM1O43490 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
PROM1O43490 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PROM1O43490 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
PROM1O43490 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
PROM1O43490 RNU6-545P-201ENST00000362681 104 ntBASIC2.6□□□□□ -1.99
PROM1O43490 RNU6-944P-201ENST00000364023 107 ntBASIC2.6□□□□□ -1.99
PROM1O43490 Y_RNA.217-201ENST00000364214 105 ntBASIC2.6□□□□□ -1.99
PROM1O43490 Y_RNA.308-201ENST00000365043 101 ntBASIC2.6□□□□□ -1.99
PROM1O43490 RNU6-47P-201ENST00000383866 107 ntBASIC2.6□□□□□ -1.99
PROM1O43490 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
PROM1O43490 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
PROM1O43490 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.6□□□□□ -1.99
PROM1O43490 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
PROM1O43490 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
PROM1O43490 AC104332.1-201ENST00000440471 797 ntBASIC2.6□□□□□ -1.99
PROM1O43490 Y_RNA.641-201ENST00000459414 105 ntBASIC2.6□□□□□ -1.99
PROM1O43490 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.6□□□□□ -1.99
PROM1O43490 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
PROM1O43490 RNY3P16-201ENST00000516338 101 ntBASIC2.6□□□□□ -1.99
PROM1O43490 AC022559.1-201ENST00000520905 205 ntBASIC2.6□□□□□ -1.99
PROM1O43490 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PROM1O43490 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PROM1O43490 snoU18.1-201ENST00000629629 71 ntBASIC2.6□□□□□ -1.99
PROM1O43490 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.6□□□□□ -1.99
PROM1O43490 Y_RNA.180-201ENST00000363867 113 ntBASIC2.59□□□□□ -1.99
PROM1O43490 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
PROM1O43490 RNU6-211P-201ENST00000384047 107 ntBASIC2.59□□□□□ -1.99
PROM1O43490 SNORA67.2-201ENST00000384300 149 ntBASIC2.59□□□□□ -1.99
PROM1O43490 RNU6-886P-201ENST00000384319 105 ntBASIC2.59□□□□□ -1.99
PROM1O43490 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
PROM1O43490 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PROM1O43490 RNA5SP508-201ENST00000411327 119 ntBASIC2.59□□□□□ -1.99
PROM1O43490 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.59□□□□□ -1.99
PROM1O43490 AL109933.2-201ENST00000452651 260 ntBASIC2.59□□□□□ -1.99
PROM1O43490 SNORD2.1-201ENST00000458762 69 ntBASIC2.59□□□□□ -1.99
PROM1O43490 RNU7-120P-201ENST00000459334 63 ntBASIC2.59□□□□□ -1.99
PROM1O43490 AL137100.2-201ENST00000555786 315 ntBASIC2.59□□□□□ -1.99
PROM1O43490 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
PROM1O43490 MIR4658-201ENST00000584344 65 ntBASIC2.59□□□□□ -1.99
PROM1O43490 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.59□□□□□ -1.99
PROM1O43490 AC008873.1-201ENST00000625051 138 ntBASIC2.59□□□□□ -1.99
PROM1O43490 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
PROM1O43490 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms