Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-855P-201ENST00000410395 104 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 TOMM22P2-201ENST00000430735 237 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 CR769767.1-201ENST00000436337 346 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 RPS3P1-201ENST00000456781 192 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 RN7SL297P-201ENST00000483161 293 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.24□□□□□ -1.89
SRGAP3O43295 RN7SKP164-201ENST00000516138 266 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 RNU6-313P-201ENST00000516317 112 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 AC136628.3-201ENST00000521868 290 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 AC021269.2-201ENST00000532318 330 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.24□□□□□ -1.89
SRGAP3O43295 AC069294.1-201ENST00000608397 350 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 Y_RNA.778-201ENST00000620203 90 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SRGAP3O43295 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SRGAP3O43295 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
SRGAP3O43295 RNU1-57P-201ENST00000384491 166 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 RNU6-1154P-201ENST00000391001 104 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 RNU6-710P-201ENST00000410424 105 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.23□□□□□ -1.89
SRGAP3O43295 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
SRGAP3O43295 MIR3684-201ENST00000579779 74 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 MIR3162-201ENST00000581818 82 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 AC090616.3-201ENST00000582184 217 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 MIR4672-201ENST00000583126 81 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 MIR6852-201ENST00000621699 66 ntBASIC3.23□□□□□ -1.89
SRGAP3O43295 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
SRGAP3O43295 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SRGAP3O43295 AC069528.2-201ENST00000624849 1991 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 SNORD50B-201ENST00000364995 70 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 SNORA72.4-201ENST00000384174 132 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 SNORA8.3-201ENST00000384679 139 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 RNU6-239P-201ENST00000390990 99 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 RNA5SP210-201ENST00000391034 120 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 AL365496.1-201ENST00000426885 215 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 RPL36AP48-201ENST00000485521 314 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.22□□□□□ -1.89
SRGAP3O43295 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.22□□□□□ -1.89
SRGAP3O43295 AL391813.1-201ENST00000603098 260 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 RPL12P50-201ENST00000603116 116 ntBASIC3.22□□□□□ -1.89
SRGAP3O43295 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SRGAP3O43295 AC100821.1-201ENST00000523153 2479 ntBASIC3.21□□□□□ -1.89
SRGAP3O43295 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SRGAP3O43295 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRGAP3O43295 RNU6-1290P-201ENST00000362957 109 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 snoU2_19.4-201ENST00000364329 80 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 Y_RNA.586-201ENST00000391146 98 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 EBAG9P1-201ENST00000418955 543 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 RNU6-479P-201ENST00000516348 105 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 RNU6-1007P-201ENST00000516586 107 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 AC026241.1-201ENST00000517873 2142 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 MIR4744-201ENST00000581563 82 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.21□□□□□ -1.9
SRGAP3O43295 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.21□□□□□ -1.9
SRGAP3O43295 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 AC068700.1-201ENST00000565862 3754 ntBASIC3.21□□□□□ -1.9
SRGAP3O43295 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SRGAP3O43295 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.2□□□□□ -1.9
SRGAP3O43295 Y_RNA.24-201ENST00000362508 103 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 RNU6-103P-201ENST00000363686 107 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 Y_RNA.243-201ENST00000364481 109 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 Y_RNA.341-201ENST00000365341 102 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 Y_RNA.572-201ENST00000384757 98 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 MIR569-201ENST00000385228 96 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 MIR591-201ENST00000385290 95 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 RNU6-578P-201ENST00000390980 103 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 RNU6-735P-201ENST00000410612 107 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
SRGAP3O43295 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.2□□□□□ -1.9
SRGAP3O43295 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
SRGAP3O43295 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.2□□□□□ -1.9
SRGAP3O43295 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
SRGAP3O43295 Y_RNA.802-201ENST00000614892 130 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 AL136360.1-201ENST00000503377 1900 ntBASIC3.2□□□□□ -1.9
SRGAP3O43295 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.19□□□□□ -1.9
SRGAP3O43295 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SRGAP3O43295 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SRGAP3O43295 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.9
SRGAP3O43295 U3.8-201ENST00000363675 217 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 RNA5SP68-201ENST00000363885 119 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 RNU6-899P-201ENST00000363947 107 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 RNU6-1305P-201ENST00000364353 104 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 AC107027.2-201ENST00000512197 115 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 SNORA25.12-201ENST00000516202 82 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.19□□□□□ -1.9
SRGAP3O43295 MIR4431-201ENST00000579990 94 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 AL365222.1-201ENST00000614661 98 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 AC008873.1-201ENST00000625051 138 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 U6.115-201ENST00000636045 103 ntBASIC3.19□□□□□ -1.9
SRGAP3O43295 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRGAP3O43295 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRGAP3O43295 RNU4-11P-201ENST00000365287 132 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 SNORA22C-201ENST00000384614 134 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 MIR626-201ENST00000385032 94 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms