Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
CLDN3O15551 AL133216.2-202ENST00000634512 349 ntBASIC1.14□□□□□ -2.23
CLDN3O15551 MIR1321-201ENST00000637766 79 ntBASIC1.14□□□□□ -2.23
CLDN3O15551 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN3O15551 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLDN3O15551 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN3O15551 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN3O15551 RNU7-94P-201ENST00000459576 63 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 AC092991.1-201ENST00000477176 376 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 RNU7-175P-201ENST00000515915 61 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 Y_RNA.676-201ENST00000516393 96 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 RNU6-273P-201ENST00000516937 96 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 AC103591.3-201ENST00000608684 209 ntBASIC1.13□□□□□ -2.23
CLDN3O15551 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLDN3O15551 Y_RNA.100-201ENST00000363141 102 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 Y_RNA.135-201ENST00000363439 95 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 Y_RNA.184-201ENST00000363884 108 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 DYNLT3P2-201ENST00000442517 295 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 MTND4P18-201ENST00000447010 465 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 AP000870.1-201ENST00000472927 406 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN3O15551 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN3O15551 RNU6-922P-201ENST00000516753 99 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 AC023157.2-201ENST00000540596 141 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN3O15551 MIR5695-201ENST00000579717 85 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 MIR4438-201ENST00000585271 93 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
CLDN3O15551 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
CLDN3O15551 RNU6-1090P-201ENST00000364065 94 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 SNORD116-11-201ENST00000383882 92 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 RPS27P22-201ENST00000478056 241 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.11□□□□□ -2.23
CLDN3O15551 RNU6-506P-201ENST00000516553 94 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 AC073349.3-201ENST00000617616 186 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 AL513423.1-201ENST00000621695 132 ntBASIC1.11□□□□□ -2.23
CLDN3O15551 RNU6-1080P-201ENST00000383982 107 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 Y_RNA.517-201ENST00000384551 106 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 Y_RNA.533-201ENST00000384596 114 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.1□□□□□ -2.23
CLDN3O15551 STAG3L5P-204ENST00000443759 179 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 SNORD65B-201ENST00000459126 73 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC093303.1-201ENST00000514549 295 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AL590705.4-201ENST00000532209 134 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC024909.2-201ENST00000553035 286 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN3O15551 AL162424.1-201ENST00000602325 221 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC010999.1-201ENST00000611856 324 ntBASIC1.1□□□□□ -2.23
CLDN3O15551 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 RNU4-76P-201ENST00000364509 141 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 RNU6-505P-201ENST00000384427 107 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CLDN3O15551 AC243428.1-201ENST00000421099 264 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN3O15551 MRPS10P1-201ENST00000448483 130 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AC010469.2-201ENST00000496412 480 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AC091144.1-201ENST00000519573 138 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 CYCSP23-201ENST00000519781 313 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 MIR4778-201ENST00000577635 80 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 MIR5696-201ENST00000578474 85 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.09□□□□□ -2.23
CLDN3O15551 AF250324.2-201ENST00000608299 610 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 AC024614.3-201ENST00000637860 256 ntBASIC1.09□□□□□ -2.23
CLDN3O15551 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CLDN3O15551 Y_RNA.194-201ENST00000363985 102 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 Y_RNA.405-201ENST00000383979 100 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 Y_RNA.451-201ENST00000384200 100 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 Y_RNA.524-201ENST00000384564 100 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 Y_RNA.561-201ENST00000384694 100 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 MIR10B-201ENST00000385011 110 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 MIR660-201ENST00000385235 97 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 USMG5P1-201ENST00000425964 177 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN3O15551 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 AC109635.3-201ENST00000529536 185 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN3O15551 MIR3942-201ENST00000585264 109 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 SNORA28-201ENST00000606769 126 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 AC068137.4-201ENST00000638485 296 ntBASIC1.08□□□□□ -2.24
CLDN3O15551 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLDN3O15551 MIR96-201ENST00000362288 78 ntBASIC1.07□□□□□ -2.24
CLDN3O15551 Y_RNA.41-201ENST00000362646 102 ntBASIC1.07□□□□□ -2.24
CLDN3O15551 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
CLDN3O15551 SNORA12.1-201ENST00000390873 148 ntBASIC1.07□□□□□ -2.24
CLDN3O15551 RNU6-373P-201ENST00000411247 98 ntBASIC1.07□□□□□ -2.24
CLDN3O15551 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms