Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 SNORD83.1-201ENST00000411362 77 ntBASIC-0.2□□□□□ -2.44
HMGB3O15347 ZNF885P-201ENST00000420174 1098 ntBASIC-0.2□□□□□ -2.44
HMGB3O15347 MTND3P9-201ENST00000429526 346 ntBASIC-0.2□□□□□ -2.44
HMGB3O15347 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
HMGB3O15347 RNA5SP54-201ENST00000516951 92 ntBASIC-0.2□□□□□ -2.44
HMGB3O15347 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.2□□□□□ -2.44
HMGB3O15347 SNORD118-201ENST00000363593 134 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 RNU6-108P-201ENST00000365558 107 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 MIR487A-201ENST00000385009 80 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 MIR452-201ENST00000385020 85 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 SNORD73A-201ENST00000386062 65 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGB3O15347 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGB3O15347 AC105417.1-201ENST00000514691 285 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 RNU7-172P-201ENST00000517125 64 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 RPL21P9-201ENST00000556149 474 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.21□□□□□ -2.44
HMGB3O15347 MIR4764-201ENST00000580680 88 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 RNU4-5P-201ENST00000607255 135 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 AC010487.4-201ENST00000637027 61 ntBASIC-0.21□□□□□ -2.44
HMGB3O15347 RNU4-41P-201ENST00000364426 143 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 SNORA2B-201ENST00000384583 137 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 MIR520G-201ENST00000385064 90 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 MIR520H-201ENST00000385126 88 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 MIR450B-201ENST00000401182 78 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 RNU6-613P-201ENST00000410412 108 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AL139396.1-201ENST00000421137 167 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.22□□□□□ -2.44
HMGB3O15347 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.22□□□□□ -2.44
HMGB3O15347 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AC010598.1-201ENST00000510378 103 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.22□□□□□ -2.44
HMGB3O15347 AC112693.2-201ENST00000556538 232 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 MIR4298-201ENST00000584380 73 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AC010620.1-201ENST00000601088 1102 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AC120024.3-201ENST00000603167 156 ntBASIC-0.22□□□□□ -2.44
HMGB3O15347 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.22□□□□□ -2.44
HMGB3O15347 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.22□□□□□ -2.44
HMGB3O15347 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 SNORD115-8-201ENST00000363856 82 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 SNORD115-38-201ENST00000365037 82 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 MIR1-2-201ENST00000384961 85 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
HMGB3O15347 MRPS10P2-201ENST00000431226 381 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 PCNPP5-201ENST00000452246 481 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 RNU7-138P-201ENST00000459479 64 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 AC022709.1-201ENST00000615967 87 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 MIR6734-201ENST00000621166 68 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 MTND4P9-201ENST00000507819 1346 ntBASIC-0.23□□□□□ -2.45
HMGB3O15347 MIR499A-201ENST00000384903 122 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 RNU6-679P-201ENST00000391003 106 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 RNU6-700P-201ENST00000391043 107 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 MIR1298-201ENST00000408783 112 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.24□□□□□ -2.45
HMGB3O15347 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
HMGB3O15347 RNU7-43P-201ENST00000516554 64 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 AL358944.1-201ENST00000528537 144 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 AC016957.1-201ENST00000534895 309 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.24□□□□□ -2.45
HMGB3O15347 AC104408.1-201ENST00000605241 170 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 AL157392.4-201ENST00000609756 345 ntBASIC-0.24□□□□□ -2.45
HMGB3O15347 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
HMGB3O15347 RNU6-500P-201ENST00000362349 107 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 U8.21-201ENST00000459536 136 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 AC092989.1-201ENST00000481235 277 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 MTND1P35-201ENST00000526739 508 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 AC023442.1-201ENST00000531247 422 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.25□□□□□ -2.45
HMGB3O15347 MIR3678-201ENST00000578455 94 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 MIR5190-201ENST00000581537 80 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 AC087683.1-201ENST00000591187 441 ntBASIC-0.25□□□□□ -2.45
HMGB3O15347 SNORD14.1-201ENST00000365609 90 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HMGB3O15347 RNA5SP95-201ENST00000410319 137 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.26□□□□□ -2.45
HMGB3O15347 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.26□□□□□ -2.45
HMGB3O15347 MTND1P4-201ENST00000435196 415 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 MTND4P18-201ENST00000447010 465 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.26□□□□□ -2.45
HMGB3O15347 snoU109.3-201ENST00000459477 145 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 RPL23AP75-201ENST00000491601 451 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AC107401.1-201ENST00000503426 685 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AC091951.3-201ENST00000504093 246 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AC141557.1-201ENST00000540982 400 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AC093027.1-201ENST00000546698 429 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.26□□□□□ -2.45
HMGB3O15347 AL355073.2-201ENST00000612106 557 ntBASIC-0.26□□□□□ -2.45
HMGB3O15347 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 SEPT7P4-201ENST00000437076 306 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 SNRPGP9-201ENST00000456025 225 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms