Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC009248.2-201ENST00000619826 254 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC097520.1-201ENST00000624435 385 ntBASIC0.75□□□□□ -2.29
LSM1O15116 MIR6079-201ENST00000635807 62 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC068137.4-201ENST00000638485 296 ntBASIC0.75□□□□□ -2.29
LSM1O15116 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LSM1O15116 RNU6-1266P-201ENST00000362794 105 ntBASIC0.74□□□□□ -2.29
LSM1O15116 RNU6-793P-201ENST00000384233 104 ntBASIC0.74□□□□□ -2.29
LSM1O15116 SNORD116-8-201ENST00000384365 95 ntBASIC0.74□□□□□ -2.29
LSM1O15116 RNU6-95P-201ENST00000384697 107 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AL451046.2-201ENST00000403074 277 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AL355796.1-201ENST00000406706 323 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
LSM1O15116 DAP3P1-201ENST00000441522 278 ntBASIC0.74□□□□□ -2.29
LSM1O15116 RPL30P10-201ENST00000488148 337 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AC022493.2-201ENST00000506122 481 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AL357312.1-201ENST00000603879 298 ntBASIC0.74□□□□□ -2.29
LSM1O15116 AC068137.3-201ENST00000639191 341 ntBASIC0.74□□□□□ -2.29
LSM1O15116 MIRLET7C-201ENST00000362160 84 ntBASIC0.73□□□□□ -2.29
LSM1O15116 RNU6-727P-201ENST00000363592 107 ntBASIC0.73□□□□□ -2.29
LSM1O15116 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
LSM1O15116 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
LSM1O15116 MTCO3P19-201ENST00000415864 321 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AL445305.1-201ENST00000432577 575 ntBASIC0.73□□□□□ -2.29
LSM1O15116 ERLEC1P1-201ENST00000433806 578 ntBASIC0.73□□□□□ -2.29
LSM1O15116 NDUFA5P4-201ENST00000436704 385 ntBASIC0.73□□□□□ -2.29
LSM1O15116 snoU13.25-201ENST00000458945 104 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AC010598.1-201ENST00000510378 103 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AC097462.1-201ENST00000514125 324 ntBASIC0.73□□□□□ -2.29
LSM1O15116 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
LSM1O15116 UBL5P4-201ENST00000562584 236 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM1O15116 MIR5696-201ENST00000578474 85 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AC068790.6-201ENST00000602558 258 ntBASIC0.73□□□□□ -2.29
LSM1O15116 AC004832.4-201ENST00000608952 331 ntBASIC0.73□□□□□ -2.29
LSM1O15116 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.73□□□□□ -2.29
LSM1O15116 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.73□□□□□ -2.29
LSM1O15116 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.73□□□□□ -2.29
LSM1O15116 MIR6767-201ENST00000637302 66 ntBASIC0.73□□□□□ -2.29
LSM1O15116 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
LSM1O15116 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
LSM1O15116 Y_RNA.359-201ENST00000365498 102 ntBASIC0.72□□□□□ -2.29
LSM1O15116 DEFB108C-201ENST00000400154 252 ntBASIC0.72□□□□□ -2.29
LSM1O15116 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.72□□□□□ -2.29
LSM1O15116 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.72□□□□□ -2.29
LSM1O15116 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM1O15116 MTCO2P7-201ENST00000446518 666 ntBASIC0.72□□□□□ -2.29
LSM1O15116 RNU7-66P-201ENST00000459469 62 ntBASIC0.72□□□□□ -2.29
LSM1O15116 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
LSM1O15116 Y_RNA.665-201ENST00000516177 98 ntBASIC0.72□□□□□ -2.29
LSM1O15116 RNU7-28P-201ENST00000516759 62 ntBASIC0.72□□□□□ -2.29
LSM1O15116 AC091144.1-201ENST00000519573 138 ntBASIC0.72□□□□□ -2.29
LSM1O15116 AP002001.1-203ENST00000534002 267 ntBASIC0.72□□□□□ -2.29
LSM1O15116 APOOP3-201ENST00000536787 586 ntBASIC0.72□□□□□ -2.29
LSM1O15116 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.72□□□□□ -2.29
LSM1O15116 MIR3124-201ENST00000582636 67 ntBASIC0.72□□□□□ -2.29
LSM1O15116 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
LSM1O15116 Y_RNA.77-201ENST00000362962 107 ntBASIC0.71□□□□□ -2.3
LSM1O15116 Y_RNA.135-201ENST00000363439 95 ntBASIC0.71□□□□□ -2.3
LSM1O15116 RNU6-280P-201ENST00000364145 104 ntBASIC0.71□□□□□ -2.3
LSM1O15116 Y_RNA.372-201ENST00000365599 102 ntBASIC0.71□□□□□ -2.3
LSM1O15116 MIR10B-201ENST00000385011 110 ntBASIC0.71□□□□□ -2.3
LSM1O15116 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
LSM1O15116 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
LSM1O15116 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM1O15116 PCMTD1P1-201ENST00000455560 355 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC010469.2-201ENST00000496412 480 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC010424.1-201ENST00000506336 297 ntBASIC0.71□□□□□ -2.3
LSM1O15116 SNORA70.12-201ENST00000516084 153 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM1O15116 AC007834.2-201ENST00000536310 343 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC023157.2-201ENST00000540596 141 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
LSM1O15116 AL138726.1-201ENST00000614873 333 ntBASIC0.71□□□□□ -2.3
LSM1O15116 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
LSM1O15116 RNU6-1068P-201ENST00000410958 103 ntBASIC0.7□□□□□ -2.3
LSM1O15116 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
LSM1O15116 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.7□□□□□ -2.3
LSM1O15116 AC243428.1-201ENST00000421099 264 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.7□□□□□ -2.3
LSM1O15116 AC093850.1-201ENST00000454121 251 ntBASIC0.7□□□□□ -2.3
LSM1O15116 RPS27P22-201ENST00000478056 241 ntBASIC0.7□□□□□ -2.3
LSM1O15116 Y_RNA.693-201ENST00000516641 110 ntBASIC0.7□□□□□ -2.3
LSM1O15116 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM1O15116 AC004817.2-201ENST00000561794 651 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.7□□□□□ -2.3
LSM1O15116 AL117336.2-201ENST00000602435 335 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AL096861.1-201ENST00000610899 123 ntBASIC0.7□□□□□ -2.3
LSM1O15116 AL391903.3-201ENST00000612158 163 ntBASIC0.7□□□□□ -2.3
LSM1O15116 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.7□□□□□ -2.3
LSM1O15116 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LSM1O15116 RNU6-1085P-201ENST00000363576 107 ntBASIC0.69□□□□□ -2.3
LSM1O15116 RNU5F-3P-201ENST00000363767 117 ntBASIC0.69□□□□□ -2.3
LSM1O15116 Y_RNA.179-201ENST00000363844 90 ntBASIC0.69□□□□□ -2.3
LSM1O15116 RNU6-1119P-201ENST00000384349 108 ntBASIC0.69□□□□□ -2.3
LSM1O15116 RNU6-790P-201ENST00000384479 105 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms