Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.77□□□□□ -2.53
HMGN4O00479 AC026782.1-201ENST00000512952 449 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNU6-430P-201ENST00000517078 107 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AC023442.1-201ENST00000531247 422 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AC100830.2-201ENST00000581636 240 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 MIR544B-201ENST00000582372 78 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 MIR4438-201ENST00000585271 93 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AC025449.1-201ENST00000603896 529 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AP000907.4-201ENST00000604143 237 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AC020891.4-201ENST00000605745 93 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AP002802.2-201ENST00000605877 235 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 MIR938-201ENST00000401216 83 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 ERHP2-201ENST00000402323 299 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 RNU6-284P-201ENST00000411105 106 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 MLLT10P1-201ENST00000418346 262 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AL117339.3-201ENST00000418733 162 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AC098592.1-201ENST00000419352 333 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 MTCO2P23-201ENST00000425216 680 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.78□□□□□ -2.53
HMGN4O00479 SUMO1P2-201ENST00000452524 304 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 MTND2P30-201ENST00000456663 382 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.78□□□□□ -2.53
HMGN4O00479 RNU6-341P-201ENST00000516973 96 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 RNA5SP454-201ENST00000517231 127 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AC010376.1-201ENST00000522101 334 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.78□□□□□ -2.53
HMGN4O00479 AC026371.1-201ENST00000551867 419 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 FRG2DP-202ENST00000566967 323 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AC008521.1-201ENST00000587471 187 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 MIR7107-201ENST00000611489 80 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 RN7SL660P-201ENST00000614852 299 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.78□□□□□ -2.53
HMGN4O00479 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.79□□□□□ -2.54
HMGN4O00479 RNA5SP98-201ENST00000363158 137 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 RNA5SP117-201ENST00000365294 118 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 RNU6-396P-201ENST00000365369 105 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 MIR1298-201ENST00000408783 112 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 AC079781.2-201ENST00000446424 169 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.79□□□□□ -2.54
HMGN4O00479 RNU6-180P-201ENST00000516697 61 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 AC120024.3-201ENST00000603167 156 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 MIR4251-201ENST00000635819 61 ntBASIC-0.79□□□□□ -2.54
HMGN4O00479 MIR101-1-201ENST00000362265 75 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 SNORA26-201ENST00000391286 122 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 RPS26P42-201ENST00000413485 326 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.8□□□□□ -2.54
HMGN4O00479 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 Z98949.2-201ENST00000440996 144 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.8□□□□□ -2.54
HMGN4O00479 MRPS10P1-201ENST00000448483 130 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 RPL39P34-201ENST00000477141 156 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGN4O00479 AC123904.2-201ENST00000548059 300 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 AC010525.2-201ENST00000590920 195 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 BNIP3P26-201ENST00000600827 554 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 AC096720.1-201ENST00000604441 183 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 AL139022.2-201ENST00000606934 443 ntBASIC-0.8□□□□□ -2.54
HMGN4O00479 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 SNORA24.1-201ENST00000384401 135 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 MIR15B-201ENST00000385045 98 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 MIR136-201ENST00000385207 82 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 MT-TN-201ENST00000387400 73 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 SNORA40.2-201ENST00000390847 128 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.81□□□□□ -2.54
HMGN4O00479 MTND4P19-201ENST00000446659 478 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 RPS29P15-201ENST00000458329 171 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 AC010493.1-201ENST00000513479 292 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 SNORA14.1-201ENST00000516113 141 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 SNORA18.7-201ENST00000516910 131 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 AC107934.1-201ENST00000522215 217 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 AC138869.1-201ENST00000568623 124 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 AC008608.1-201ENST00000603910 127 ntBASIC-0.81□□□□□ -2.54
HMGN4O00479 RNY4P24-201ENST00000362735 96 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 SNORD45.3-201ENST00000363836 72 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 MIR625-201ENST00000385047 85 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 MIR516B2-201ENST00000385190 85 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 RNU2-8P-201ENST00000410727 190 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AC243428.1-201ENST00000421099 264 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AC087499.4-201ENST00000448505 178 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 MTND1P12-201ENST00000455231 147 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGN4O00479 RNU6-344P-201ENST00000516635 111 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGN4O00479 AC007751.1-201ENST00000529260 376 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGN4O00479 AL355375.2-201ENST00000574825 175 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AC091178.2-201ENST00000584401 117 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGN4O00479 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.82□□□□□ -2.54
HMGN4O00479 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms