Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SNORD65B-201ENST00000459126 73 ntBASIC1.28□□□□□ -2.2
SYCE3A1L190 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
SYCE3A1L190 RPS29P25-201ENST00000481709 171 ntBASIC1.28□□□□□ -2.2
SYCE3A1L190 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.28□□□□□ -2.2
SYCE3A1L190 MIR4273-201ENST00000582824 84 ntBASIC1.28□□□□□ -2.2
SYCE3A1L190 AC010999.1-201ENST00000611856 324 ntBASIC1.28□□□□□ -2.2
SYCE3A1L190 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SYCE3A1L190 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYCE3A1L190 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
SYCE3A1L190 MIR337-201ENST00000362281 93 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 Y_RNA.405-201ENST00000383979 100 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 Y_RNA.451-201ENST00000384200 100 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 Y_RNA.524-201ENST00000384564 100 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 Y_RNA.561-201ENST00000384694 100 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.27□□□□□ -2.21
SYCE3A1L190 MTND1P17-201ENST00000448961 204 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.27□□□□□ -2.21
SYCE3A1L190 RNU6-720P-201ENST00000516363 108 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 RNU6-566P-201ENST00000516790 107 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 AC091144.1-201ENST00000519573 138 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 AC006435.5-201ENST00000624486 112 ntBASIC1.27□□□□□ -2.21
SYCE3A1L190 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
SYCE3A1L190 RNU6-623P-201ENST00000363143 105 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 Y_RNA.157-201ENST00000363638 102 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 RNU6-281P-201ENST00000384212 103 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 RNU1-139P-201ENST00000391307 165 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
SYCE3A1L190 AP1B1P2-201ENST00000416196 106 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AC009161.1-201ENST00000417306 376 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 MTND3P23-201ENST00000431980 347 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AL133373.1-201ENST00000497098 94 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AL355802.3-201ENST00000607571 545 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
SYCE3A1L190 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYCE3A1L190 RNU6-1059P-201ENST00000363752 98 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 Y_RNA.184-201ENST00000363884 108 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RNU6-1013P-201ENST00000384180 107 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RNU6-842P-201ENST00000384269 107 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.25□□□□□ -2.21
SYCE3A1L190 USMG5P1-201ENST00000425964 177 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 USP9YP30-201ENST00000430729 455 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 SNORD5.1-201ENST00000458800 75 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.25□□□□□ -2.21
SYCE3A1L190 AC105313.1-201ENST00000509121 353 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RNU6-273P-201ENST00000516937 96 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.25□□□□□ -2.21
SYCE3A1L190 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 AC100810.6-201ENST00000638068 285 ntBASIC1.25□□□□□ -2.21
SYCE3A1L190 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYCE3A1L190 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 Y_RNA.301-201ENST00000364990 103 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 AL603825.1-201ENST00000438481 80 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 MTND4LP16-201ENST00000440828 295 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 RNU6-1114P-201ENST00000516022 107 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 Y_RNA.683-201ENST00000516508 93 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 APOOP3-201ENST00000536787 586 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 MIR4498-201ENST00000577599 66 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 MIR5695-201ENST00000579717 85 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 MIR4438-201ENST00000585271 93 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 AL162424.1-201ENST00000602325 221 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 U4.5-201ENST00000617137 123 ntBASIC1.24□□□□□ -2.21
SYCE3A1L190 AC018630.2-201ENST00000534866 2403 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 Y_RNA.3-201ENST00000362331 103 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 Y_RNA.573-201ENST00000384763 105 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 TOMM22P2-201ENST00000430735 237 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 MRPS10P1-201ENST00000448483 130 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.23□□□□□ -2.21
SYCE3A1L190 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.23□□□□□ -2.21
SYCE3A1L190 AC093852.1-201ENST00000503587 266 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 AC010598.1-201ENST00000510378 103 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.23□□□□□ -2.21
SYCE3A1L190 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
SYCE3A1L190 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 AC099654.5-201ENST00000636479 350 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.23□□□□□ -2.21
SYCE3A1L190 Y_RNA.295-201ENST00000364918 102 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 RNU4-12P-201ENST00000365233 139 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
SYCE3A1L190 Y_RNA.706-201ENST00000516933 99 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 RNU1-54P-201ENST00000517181 120 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 MIR5701-3-201ENST00000578890 82 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 MIR5701-1-201ENST00000585138 82 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 AC012557.2-201ENST00000605919 418 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 AC100812.1-201ENST00000607622 580 ntBASIC1.22□□□□□ -2.21
SYCE3A1L190 AL021879.1-201ENST00000611756 288 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms