Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SNORD50.1-201ENST00000362987 71 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 RNU6-727P-201ENST00000363592 107 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 Y_RNA.184-201ENST00000363884 108 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 SNORD114-22-201ENST00000365423 72 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AC079354.2-201ENST00000453523 154 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AL049830.1-201ENST00000468034 425 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AC010469.2-201ENST00000496412 480 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AC010598.1-201ENST00000510378 103 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 CBX3P8-201ENST00000532412 525 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AC023157.2-201ENST00000540596 141 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 PRELID3BP2-201ENST00000605362 201 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 AL158063.1-201ENST00000615349 536 ntBASIC0.6□□□□□ -2.31
TRAV25A0A0B4J276 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 RNU6-128P-201ENST00000383976 107 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 CALM2P3-201ENST00000400429 449 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 MTCO3P19-201ENST00000415864 321 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 USP9YP29-201ENST00000445112 563 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 MTND4P18-201ENST00000447010 465 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 OR9P1P-201ENST00000496431 281 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 RN7SKP298-201ENST00000515950 94 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AC027419.1-201ENST00000522976 328 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AK6P2-201ENST00000549020 471 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 7SK.7-201ENST00000603504 247 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AC004832.4-201ENST00000608952 331 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AC106800.4-201ENST00000614905 153 ntBASIC0.59□□□□□ -2.31
TRAV25A0A0B4J276 AC121333.1-201ENST00000567488 2709 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.100-201ENST00000363141 102 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.179-201ENST00000363844 90 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.238-201ENST00000364441 102 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 SNORA75.2-201ENST00000391138 150 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 SNORA75.3-201ENST00000391231 150 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 RNA5SP482-201ENST00000391269 118 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC104332.1-201ENST00000440471 797 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC093850.1-201ENST00000454121 251 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC091179.3-201ENST00000474761 144 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC097462.1-201ENST00000514125 324 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 RNU7-172P-201ENST00000517125 64 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 MIR4698-201ENST00000577795 80 ntBASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
TRAV25A0A0B4J276 SNORD113-7-201ENST00000363762 77 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 RNU6-1322P-201ENST00000364309 107 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 MTCO1P20-201ENST00000425366 358 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 PCMTD1P1-201ENST00000455560 355 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AC083798.1-201ENST00000472671 131 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 MTCO2P30-201ENST00000503662 364 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 SNORD111.1-201ENST00000516421 86 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.695-201ENST00000516715 107 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 RNU6-341P-201ENST00000516973 96 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AP002004.2-201ENST00000531656 154 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AC027288.2-201ENST00000553028 243 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 CYP3A137P-201ENST00000562436 69 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 PIGPP4-201ENST00000584447 307 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AP001330.5-201ENST00000607176 411 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 AC073114.1-201ENST00000612027 490 ntBASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.226-201ENST00000364337 114 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.267-201ENST00000364679 109 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 RNU4-20P-201ENST00000365601 151 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 Y_RNA.481-201ENST00000384373 102 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 RNU6-159P-201ENST00000391080 106 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 MIR1287-201ENST00000408492 90 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 RNU4-55P-201ENST00000410731 137 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 Z82188.1-201ENST00000436709 154 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 MTND3P16-201ENST00000452205 344 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 AC113410.1-201ENST00000505029 247 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 AC093303.1-201ENST00000514549 295 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 POLR3GP2-201ENST00000588366 668 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 AL391903.3-201ENST00000612158 163 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 ELL2P3-201ENST00000457883 1602 ntBASIC0.56□□□□□ -2.32
TRAV25A0A0B4J276 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 SNORA69-201ENST00000383895 132 ntBASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 DAP3P1-201ENST00000441522 278 ntBASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 RNU7-187P-201ENST00000458985 68 ntBASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 MIR3684-201ENST00000579779 74 ntBASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
TRAV25A0A0B4J276 FAM157A-202ENST00000615155 405 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms