Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 OR5AK4P-201ENST00000635912 903 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 MIR487A-201ENST00000385009 80 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 RNU6-415P-201ENST00000516252 97 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 RNU7-99P-201ENST00000516271 62 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 RNU6-917P-201ENST00000516294 104 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 RNU6-430P-201ENST00000517078 107 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 MTCO2P4-201ENST00000517968 247 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 MTND1P35-201ENST00000526739 508 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 CPDP1-201ENST00000579660 283 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 AC011712.1-201ENST00000588959 234 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 AL357312.1-201ENST00000603879 298 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 AC103705.1-201ENST00000619013 241 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 U6.73-201ENST00000619194 103 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
USH1CQ9Y6N9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-996P-201ENST00000365438 107 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1329P-201ENST00000365664 107 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 Y_RNA.393-201ENST00000383936 102 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1103P-201ENST00000384150 107 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1158P-201ENST00000391167 107 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 MIR450B-201ENST00000401182 78 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AL049545.1-201ENST00000401856 572 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 MTCO2P18-201ENST00000457151 658 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU7-63P-201ENST00000459054 62 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU7-94P-201ENST00000459576 63 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-405P-201ENST00000516637 110 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AC087854.1-201ENST00000519706 414 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 SNORA28-201ENST00000606769 126 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 SNORD11B-201ENST00000607707 90 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 AC109347.2-201ENST00000610220 349 ntBASIC0.54□□□□□ -2.32
USH1CQ9Y6N9 RNU6-784P-201ENST00000384330 106 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AL606923.1-201ENST00000406616 190 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AL358934.1-201ENST00000432346 324 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RPEP5-201ENST00000441137 268 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RNU7-90P-201ENST00000459216 62 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RNU7-21P-201ENST00000459430 62 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 MTCO3P38-201ENST00000468910 766 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RN7SKP287-201ENST00000516546 266 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 MTND1P5-201ENST00000517906 940 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AL118558.2-201ENST00000556294 238 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RN7SL793P-201ENST00000583259 296 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AC087683.1-201ENST00000591187 441 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AC093424.1-201ENST00000604999 338 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 AC072046.2-201ENST00000618366 268 ntBASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 RNU6-1266P-201ENST00000362794 105 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 Y_RNA.167-201ENST00000363735 109 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 RNU6-82P-201ENST00000363970 107 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 SNORA2.2-201ENST00000365473 135 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 MIR521-1-201ENST00000384902 87 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 MIR7-2-201ENST00000384970 110 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 MTCO2P19-201ENST00000427513 598 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 CALM2P4-201ENST00000430810 426 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 TPT1P7-201ENST00000458300 517 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 RNU6-189P-201ENST00000516120 101 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AK6P2-201ENST00000549020 471 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 MTND1P24-201ENST00000552175 861 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 MIR3908-201ENST00000579798 126 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AC004223.2-201ENST00000590309 544 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.52□□□□□ -2.33
USH1CQ9Y6N9 SNORD115-8-201ENST00000363856 82 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 SNORD115-38-201ENST00000365037 82 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 SNORA72.3-201ENST00000365074 132 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 RNU6-348P-201ENST00000384386 107 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 SNORD116-13-201ENST00000384408 92 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 SNORA75.2-201ENST00000391138 150 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 SNORA75.3-201ENST00000391231 150 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AL353193.1-201ENST00000421444 268 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AC093850.1-201ENST00000454121 251 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AP002001.1-203ENST00000534002 267 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AL157687.1-201ENST00000554853 619 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms