Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.03□□□□□ -2.24
KCNIP3Q9Y2W7 EIF1P4-201ENST00000572664 335 ntBASIC1.03□□□□□ -2.24
KCNIP3Q9Y2W7 AL050343.2-201ENST00000607338 280 ntBASIC1.03□□□□□ -2.24
KCNIP3Q9Y2W7 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
KCNIP3Q9Y2W7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KCNIP3Q9Y2W7 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.89-201ENST00000363031 102 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.157-201ENST00000363638 102 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 RNU1-139P-201ENST00000391307 165 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 AC009161.1-201ENST00000417306 376 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 MTND1P17-201ENST00000448961 204 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-1088P-201ENST00000516850 104 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 MIR4273-201ENST00000582824 84 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 AL355802.3-201ENST00000607571 545 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 AC010999.1-201ENST00000611856 324 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.02□□□□□ -2.25
KCNIP3Q9Y2W7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.184-201ENST00000363884 108 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.405-201ENST00000383979 100 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.436-201ENST00000384097 102 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.450-201ENST00000384198 113 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.451-201ENST00000384200 100 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-831P-201ENST00000384548 107 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.524-201ENST00000384564 100 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.554-201ENST00000384672 102 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.561-201ENST00000384694 100 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 AL034345.1-201ENST00000407768 123 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 USMG5P1-201ENST00000425964 177 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 MTND3P23-201ENST00000431980 347 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 MRPS10P1-201ENST00000448483 130 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 SNORD65B-201ENST00000459126 73 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RPS29P25-201ENST00000481709 171 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RNU1-92P-201ENST00000517017 135 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-165P-201ENST00000517170 99 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 AC091144.1-201ENST00000519573 138 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 MIR4438-201ENST00000585271 93 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 AL162424.1-201ENST00000602325 221 ntBASIC1.01□□□□□ -2.25
KCNIP3Q9Y2W7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-1013P-201ENST00000384180 107 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-505P-201ENST00000384427 107 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNA5SP213-201ENST00000391031 106 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-720P-201ENST00000516363 108 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.683-201ENST00000516508 93 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-273P-201ENST00000516937 96 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 MIR5695-201ENST00000579717 85 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AL645939.4-201ENST00000604495 135 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AC073349.3-201ENST00000617616 186 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 AC018630.2-201ENST00000534866 2403 ntBASIC1□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-623P-201ENST00000363143 105 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-1059P-201ENST00000363752 98 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-281P-201ENST00000384212 103 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-842P-201ENST00000384269 107 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 MIR660-201ENST00000385235 97 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RPL37P10-201ENST00000412884 288 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC016907.1-201ENST00000419483 435 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 USP9YP30-201ENST00000430729 455 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 MTND4LP16-201ENST00000440828 295 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 SNORD5.1-201ENST00000458800 75 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC092991.1-201ENST00000477176 376 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC105313.1-201ENST00000509121 353 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC010598.1-201ENST00000510378 103 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-566P-201ENST00000516790 107 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 RNU1-54P-201ENST00000517181 120 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AP000889.1-201ENST00000530968 660 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC100812.1-201ENST00000607622 580 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 U4.5-201ENST00000617137 123 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AC100810.6-201ENST00000638068 285 ntBASIC0.99□□□□□ -2.25
KCNIP3Q9Y2W7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.573-201ENST00000384763 105 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 MIR634-201ENST00000385208 97 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 SNORA40.6-201ENST00000391153 128 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 USP9YP16-201ENST00000430287 407 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC010095.1-201ENST00000443543 144 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 USP9YP23-201ENST00000455085 407 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 RPS29P29-201ENST00000456396 171 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 RNA5SP404-201ENST00000517118 132 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC073413.2-201ENST00000604332 360 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC012557.2-201ENST00000605919 418 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms