Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AP001486.1-201ENST00000463339 476 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 AC091544.4-201ENST00000555268 342 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 uc_338.14-201ENST00000613162 166 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 U7.4-201ENST00000614961 63 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
VPS9D1Q9Y2B5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 RNU6-442P-201ENST00000383968 104 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 MIR522-201ENST00000385071 87 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 RPS15AP28-201ENST00000435088 386 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 RNA5SP310-201ENST00000459084 116 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 snoU13.1-201ENST00000459157 104 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 RNA5SP73-201ENST00000516744 108 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 IFITM8P-201ENST00000522529 394 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VPS9D1Q9Y2B5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 HMGN2P8-201ENST00000391458 268 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 RNU6-1186P-201ENST00000410429 97 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 AC097463.2-201ENST00000421074 142 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 RPL18P10-201ENST00000425606 538 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 AC009414.1-201ENST00000427200 443 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 AC025750.2-201ENST00000442609 450 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 AC091564.4-201ENST00000533934 2194 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 AC069240.1-201ENST00000548774 375 ntBASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS9D1Q9Y2B5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AP003122.5-201ENST00000527668 3766 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 HLA-N-201ENST00000437516 135 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AP002884.2-201ENST00000471647 395 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AL358944.1-201ENST00000528537 144 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 MIR4715-201ENST00000584117 79 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AC002984.1-201ENST00000591692 448 ntBASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VPS9D1Q9Y2B5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 MIR448-201ENST00000362131 111 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 SNORD14E-201ENST00000364009 85 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AL627390.1-201ENST00000396055 340 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 Y_RNA.609-201ENST00000410669 89 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 CYCSP19-201ENST00000411715 316 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AL035398.1-201ENST00000430869 322 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AC087499.4-201ENST00000448505 178 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 RNU7-23P-201ENST00000459465 62 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AC025445.1-201ENST00000502728 300 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 RNU7-99P-201ENST00000516271 62 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AL110115.1-201ENST00000614396 364 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 AL512310.12-203ENST00000640543 90 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 USP8P1-201ENST00000494673 3183 ntBASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS9D1Q9Y2B5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 AC008264.2-201ENST00000610193 3731 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 MIR342-201ENST00000362212 99 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 RNU6-268P-201ENST00000364174 107 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 Y_RNA.267-201ENST00000364679 109 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 SNORA62-201ENST00000365493 153 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 SNX2P2-201ENST00000424553 323 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 RN7SL385P-201ENST00000468873 276 ntBASIC4.22□□□□□ -1.73
VPS9D1Q9Y2B5 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms