Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF6Q9Y252 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.32□□□□□ -2.2
RNF6Q9Y252 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.32□□□□□ -2.2
RNF6Q9Y252 MTND4P12-201ENST00000498999 1377 ntBASIC1.32□□□□□ -2.2
RNF6Q9Y252 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 Y_RNA.157-201ENST00000363638 102 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU6-1059P-201ENST00000363752 98 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU6-280P-201ENST00000364145 104 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU4-40P-201ENST00000364351 143 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 Y_RNA.355-201ENST00000365462 98 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU6-1148P-201ENST00000410992 104 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF6Q9Y252 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU6-221P-201ENST00000459541 99 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 RNU6-566P-201ENST00000516790 107 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF6Q9Y252 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.31□□□□□ -2.2
RNF6Q9Y252 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF6Q9Y252 U4.5-201ENST00000617137 123 ntBASIC1.31□□□□□ -2.2
RNF6Q9Y252 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
RNF6Q9Y252 Y_RNA.48-201ENST00000362710 103 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 Y_RNA.405-201ENST00000383979 100 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 Y_RNA.451-201ENST00000384200 100 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNU6-793P-201ENST00000384233 104 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNU6-17P-201ENST00000384245 107 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNU6-18P-201ENST00000384527 107 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 Y_RNA.524-201ENST00000384564 100 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 Y_RNA.561-201ENST00000384694 100 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNA5SP118-201ENST00000410385 109 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNU6-1186P-201ENST00000410429 97 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 USP9YP30-201ENST00000430729 455 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 AC091179.3-201ENST00000474761 144 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 RNU6-718P-201ENST00000516166 105 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 AC134698.4-201ENST00000523451 826 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 MIR5696-201ENST00000578474 85 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.3□□□□□ -2.2
RNF6Q9Y252 MIR5695-201ENST00000579717 85 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 MIR3688-2-201ENST00000636963 87 ntBASIC1.3□□□□□ -2.2
RNF6Q9Y252 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
RNF6Q9Y252 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RNF6Q9Y252 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
RNF6Q9Y252 RNU6-1266P-201ENST00000362794 105 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 Y_RNA.179-201ENST00000363844 90 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 SNORD116-4-201ENST00000384733 96 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 RNU6-159P-201ENST00000391080 106 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 RPL21P1-201ENST00000399532 476 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 MIR548F1-201ENST00000408667 84 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AC243428.1-201ENST00000421099 264 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AL139396.1-201ENST00000421137 167 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF6Q9Y252 AP000870.1-201ENST00000472927 406 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 RNU4-49P-201ENST00000516080 140 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 RNU6-107P-201ENST00000516643 102 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AC024995.1-201ENST00000523014 93 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AL590705.4-201ENST00000532209 134 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.29□□□□□ -2.2
RNF6Q9Y252 MIR4790-201ENST00000577799 79 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AL359075.3-201ENST00000613288 217 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 ZNF299P-201ENST00000406845 1804 ntBASIC1.29□□□□□ -2.2
RNF6Q9Y252 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
RNF6Q9Y252 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RNF6Q9Y252 MIR302D-201ENST00000362275 68 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 Y_RNA.116-201ENST00000363292 103 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 U3.8-201ENST00000363675 217 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 RNU6-137P-201ENST00000363680 108 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.28□□□□□ -2.2
RNF6Q9Y252 MIR518E-201ENST00000385252 88 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RNF6Q9Y252 MIR1185-2-201ENST00000408687 86 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC010154.1-201ENST00000425857 269 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC005002.2-201ENST00000438228 269 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 HMGN1P7-201ENST00000491722 313 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 Y_RNA.682-201ENST00000516457 100 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC027419.1-201ENST00000522976 328 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AK6P2-201ENST00000549020 471 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.28□□□□□ -2.2
RNF6Q9Y252 AL929325.1-201ENST00000603096 117 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC090517.2-201ENST00000614966 680 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AC027514.1-201ENST00000588561 1603 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 MTND5P35-201ENST00000557537 1720 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
RNF6Q9Y252 SNORD33-201ENST00000362761 85 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 RNU5F-3P-201ENST00000363767 117 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 Y_RNA.224-201ENST00000364308 111 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 USMG5P1-201ENST00000425964 177 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
RNF6Q9Y252 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.27□□□□□ -2.21
RNF6Q9Y252 Y_RNA.706-201ENST00000516933 99 ntBASIC1.27□□□□□ -2.21
RNF6Q9Y252 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 254.2 ms