Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNA5SP200-201ENST00000516360 103 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 RNU4-77P-201ENST00000516692 156 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 AC092447.9-201ENST00000603395 144 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 MIR6873-201ENST00000622788 63 ntBASIC1.82□□□□□ -2.12
CHMP1AQ9HD42 AL136360.1-201ENST00000503377 1900 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 MIR369-201ENST00000362155 70 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 MIR410-201ENST00000362222 80 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.394-201ENST00000383942 103 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.395-201ENST00000383945 109 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RNU6-926P-201ENST00000384075 107 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.431-201ENST00000384086 102 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.535-201ENST00000384612 99 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RAB28P5-201ENST00000427490 651 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 AC018634.1-201ENST00000437554 401 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RPL26P26-201ENST00000480251 434 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 RNU6-911P-201ENST00000516523 104 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 AC084364.2-201ENST00000546924 395 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 VN1R91P-201ENST00000594377 169 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 AC069114.2-201ENST00000604699 304 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 uc_338.22-201ENST00000622722 187 ntBASIC1.81□□□□□ -2.12
CHMP1AQ9HD42 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-961P-201ENST00000363893 105 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-454P-201ENST00000364292 107 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU1-115P-201ENST00000365329 160 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNY1P14-201ENST00000384426 108 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNA5SP467-201ENST00000391274 118 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 MIR1253-201ENST00000408273 105 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 SNORA11.4-201ENST00000408823 129 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 AL137792.2-201ENST00000443484 235 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.639-201ENST00000458981 102 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 SNORD65B-201ENST00000459126 73 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 AC010469.2-201ENST00000496412 480 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RPL23AP63-201ENST00000498752 471 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-1170P-201ENST00000515974 106 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-1146P-201ENST00000516282 102 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-1012P-201ENST00000516606 109 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 MIR5002-201ENST00000584713 97 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 MTND4P29-201ENST00000503122 1372 ntBASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CHMP1AQ9HD42 RNU6-797P-201ENST00000363101 109 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.112-201ENST00000363250 102 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 RNU6-1019P-201ENST00000364424 107 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 MIR628-201ENST00000385229 95 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 RNU6-408P-201ENST00000515910 100 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 AC055872.1-201ENST00000570978 278 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 MIR5188-201ENST00000583467 113 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 SNORD58B-201ENST00000607313 66 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 AL160413.1-201ENST00000622780 310 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 U6.108-201ENST00000637764 58 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 AC010615.1-201ENST00000594254 1764 ntBASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.80-201ENST00000362996 102 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.813-201ENST00000364639 102 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 Y_RNA.485-201ENST00000384395 102 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AC009963.1-201ENST00000417265 157 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 SCARNA16.3-201ENST00000516595 184 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AC011476.5-201ENST00000615594 130 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AC007485.1-201ENST00000616755 206 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AC090574.1-201ENST00000623186 233 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 AL606534.2-204ENST00000635008 178 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 U6.92-201ENST00000636464 89 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
CHMP1AQ9HD42 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.27-201ENST00000362540 103 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.31-201ENST00000362574 102 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 RNU6-1266P-201ENST00000362794 105 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 SNORA63D-201ENST00000364359 132 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 AL355796.1-201ENST00000406706 323 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 FCF1P4-201ENST00000448326 183 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 HMGN1P13-201ENST00000505795 138 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 RNU7-128P-201ENST00000517247 62 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms