Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC008134.1-201ENST00000420943 193 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 RPL17P35-201ENST00000432217 549 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AL392103.1-201ENST00000447000 198 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AC025647.1-201ENST00000517879 253 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AC010376.1-201ENST00000522101 334 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 DEFB131C-201ENST00000528817 165 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 AC099785.1-201ENST00000605697 437 ntBASIC-0.75□□□□□ -2.53
SCAPERQ9BY12 RNU6-511P-201ENST00000363496 107 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 RNU6-371P-201ENST00000364283 108 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 RNU6-735P-201ENST00000410612 107 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 AL360271.2-201ENST00000447710 161 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 AC013470.1-201ENST00000453438 462 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 RNU7-57P-201ENST00000459540 60 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 AC010486.2-201ENST00000505572 483 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 RNU7-129P-201ENST00000516128 62 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 MRPS36P4-201ENST00000534436 298 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.76□□□□□ -2.53
SCAPERQ9BY12 RNY3P13-201ENST00000365542 102 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 MIR520C-201ENST00000385005 87 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 RNA5SP300-201ENST00000391197 107 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 SNORD100-201ENST00000408573 76 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 AC107401.1-201ENST00000503426 685 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 RNU7-41P-201ENST00000515917 61 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 RNU6-782P-201ENST00000516852 104 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 AP001372.4-201ENST00000524889 472 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 AC027288.2-201ENST00000553028 243 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 U6.73-201ENST00000619194 103 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 MTND4P4-201ENST00000439033 1366 ntBASIC-0.77□□□□□ -2.53
SCAPERQ9BY12 RNU6-925P-201ENST00000384629 104 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RNU6-284P-201ENST00000411105 106 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 AL031779.1-201ENST00000415663 330 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RPS29P15-201ENST00000458329 171 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RPL17P19-201ENST00000489069 552 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RNU4-49P-201ENST00000516080 140 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 ADI1P3-201ENST00000549509 470 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 AC093875.1-201ENST00000623688 504 ntBASIC-0.78□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 RNA5SP48-201ENST00000363969 126 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 RNU6-613P-201ENST00000410412 108 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 AC012306.1-201ENST00000423267 114 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 USP9YP29-201ENST00000445112 563 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 MTND1P17-201ENST00000448961 204 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 AC091021.1-201ENST00000468051 388 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 AC008628.2-201ENST00000502605 298 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 RNU2-10P-201ENST00000516375 211 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 AL355073.2-201ENST00000612106 557 ntBASIC-0.79□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AC069271.1-201ENST00000445577 156 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AC005042.3-201ENST00000453230 174 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AP001328.1-201ENST00000528550 176 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 MIR5692A1-201ENST00000580523 69 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 MIR4804-201ENST00000581683 73 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 MIR3666-201ENST00000607845 111 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AC005562.2-201ENST00000618264 111 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 AC098679.4-201ENST00000624241 654 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 snoZ196.1-201ENST00000625269 89 ntBASIC-0.8□□□□□ -2.54
SCAPERQ9BY12 MIR586-201ENST00000385035 97 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 MIR5006-201ENST00000583027 110 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 MIRLET7C-201ENST00000362160 84 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 RNU6-934P-201ENST00000365154 107 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 RNU6-221P-201ENST00000459541 99 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 AC068790.2-201ENST00000602601 557 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.81□□□□□ -2.54
SCAPERQ9BY12 SNORA36.1-201ENST00000363424 132 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 MIR601-201ENST00000385256 79 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 MIR891A-201ENST00000401237 79 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 MIR1302-7-201ENST00000408841 72 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 RNA5SP95-201ENST00000410319 137 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms