Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 RNU4-71P-201ENST00000516258 113 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.39□□□□□ -2.03
MEIS3Q99687 MIR4423-201ENST00000580922 80 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 AC008749.1-201ENST00000597650 306 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.39□□□□□ -2.03
MEIS3Q99687 AC137590.2-201ENST00000619709 240 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 SNORD98-201ENST00000636377 67 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MEIS3Q99687 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.38□□□□□ -2.03
MEIS3Q99687 Y_RNA.44-201ENST00000362676 108 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 Y_RNA.83-201ENST00000363005 113 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 Y_RNA.199-201ENST00000364014 102 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 RNU6-198P-201ENST00000384258 104 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 RNU6-21P-201ENST00000384710 107 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 Y_RNA.570-201ENST00000384750 101 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 AL358075.3-201ENST00000426289 226 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.38□□□□□ -2.03
MEIS3Q99687 RPS29P11-201ENST00000496507 171 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 RNY3P16-201ENST00000516338 101 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 SNORA25.14-201ENST00000516481 132 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 RNU6-56P-201ENST00000516986 93 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.38□□□□□ -2.03
MEIS3Q99687 AP002001.1-203ENST00000534002 267 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 NACAP3-201ENST00000552100 481 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
MEIS3Q99687 AC127459.3-201ENST00000624328 466 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
MEIS3Q99687 AC099654.7-201ENST00000635788 2127 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
MEIS3Q99687 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
MEIS3Q99687 AC004944.1-201ENST00000517807 3059 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 Y_RNA.101-201ENST00000363154 102 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 Y_RNA.270-201ENST00000364693 104 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RNU6-662P-201ENST00000384253 104 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 Y_RNA.785-201ENST00000384290 109 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 PCNPP3-201ENST00000393579 471 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RN7SKP51-201ENST00000410781 304 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 Y_RNA.793-201ENST00000411222 111 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 AC004866.1-201ENST00000411748 78 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 COX6CP10-201ENST00000416832 224 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.37□□□□□ -2.03
MEIS3Q99687 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.37□□□□□ -2.03
MEIS3Q99687 AL121890.1-201ENST00000435457 205 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RPS29P12-201ENST00000460178 152 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 AC091179.3-201ENST00000474761 144 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RPS23P5-201ENST00000495419 428 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 SEPT14P8-201ENST00000508026 178 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RNU5F-2P-201ENST00000516066 82 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 RNU2-31P-201ENST00000516954 155 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 SNORD113-5-201ENST00000607261 78 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
MEIS3Q99687 MTND5P35-201ENST00000557537 1720 ntBASIC2.37□□□□□ -2.03
MEIS3Q99687 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MEIS3Q99687 RNU6-923P-201ENST00000364753 107 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 Y_RNA.331-201ENST00000365267 102 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 Y_RNA.383-201ENST00000383855 97 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 RNU6-886P-201ENST00000384319 105 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 RNU6-19P-201ENST00000384718 107 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 SNORA26.3-201ENST00000391119 136 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 MIR208B-201ENST00000401172 77 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AL033519.2-201ENST00000403958 392 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 Y_RNA.626-201ENST00000411288 95 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC078809.1-201ENST00000427601 140 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 MTCO1P5-201ENST00000433573 344 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 Y_RNA.644-201ENST00000459006 113 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.36□□□□□ -2.03
MEIS3Q99687 AC091959.1-201ENST00000495857 238 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
MEIS3Q99687 Y_RNA.674-201ENST00000516362 113 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 RNU6-255P-201ENST00000516957 105 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.36□□□□□ -2.03
MEIS3Q99687 DEFB131C-201ENST00000528817 165 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC087441.2-201ENST00000529141 262 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.36□□□□□ -2.03
MEIS3Q99687 AC021231.3-201ENST00000558497 370 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.36□□□□□ -2.03
MEIS3Q99687 AC005176.2-201ENST00000596933 147 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC010999.1-201ENST00000611856 324 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AC006001.4-201ENST00000622243 395 ntBASIC2.36□□□□□ -2.03
MEIS3Q99687 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.36□□□□□ -2.03
MEIS3Q99687 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MEIS3Q99687 AL356292.1-201ENST00000283110 373 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 AC092268.1-201ENST00000342691 405 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 MIR411-201ENST00000362239 96 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 RNU6-1159P-201ENST00000362933 107 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 Y_RNA.122-201ENST00000363331 96 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 SNORD115-8-201ENST00000363856 82 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 Y_RNA.292-201ENST00000364904 97 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 SNORD115-38-201ENST00000365037 82 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 MIR9-3-201ENST00000385084 90 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 CBX3P9-201ENST00000402326 552 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 RNA5SP390-201ENST00000410191 113 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 RNU5A-5P-201ENST00000411054 116 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 PTGES3P4-201ENST00000426243 356 ntBASIC2.35□□□□□ -2.03
MEIS3Q99687 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.35□□□□□ -2.03
MEIS3Q99687 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms