Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNU6-1127P-201ENST00000384580 107 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 MIR454-201ENST00000390180 115 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RNU6-1106P-201ENST00000390845 107 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RNA5SP63-201ENST00000391225 112 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0□□□□□ -2.41
LYSMD1Q96S90 AL390237.1-201ENST00000404226 1415 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 MIR320B2-201ENST00000408479 138 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RNU6-177P-201ENST00000411257 104 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RPS26P42-201ENST00000413485 326 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 AC093019.1-201ENST00000443135 252 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0□□□□□ -2.41
LYSMD1Q96S90 SNRPGP12-201ENST00000449481 213 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 SCARNA18-201ENST00000459004 134 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 AP000870.1-201ENST00000472927 406 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0□□□□□ -2.41
LYSMD1Q96S90 Vault.3-201ENST00000516676 95 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RNU6-1116P-201ENST00000517269 99 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0□□□□□ -2.41
LYSMD1Q96S90 MIR4431-201ENST00000579990 94 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 AC007684.1-201ENST00000609671 477 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0□□□□□ -2.41
LYSMD1Q96S90 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 RNU6-227P-201ENST00000362865 103 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 MIR1827-201ENST00000408549 66 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 MIR1197-201ENST00000408818 88 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 RNU2-46P-201ENST00000517038 113 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 AC036111.3-201ENST00000526389 112 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 MIR4703-201ENST00000577728 79 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 BNIP3P39-201ENST00000601077 554 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 Z84480.1-201ENST00000605131 311 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 SNORD11B-201ENST00000607707 90 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 AC091304.9-201ENST00000612091 226 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 AC137590.2-201ENST00000619709 240 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 AC139792.3-201ENST00000623525 224 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.01□□□□□ -2.41
LYSMD1Q96S90 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 RNU6-137P-201ENST00000363680 108 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 RNU6-906P-201ENST00000384700 70 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 MIR1-2-201ENST00000384961 85 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AL355143.1-201ENST00000407101 841 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 RNU6-195P-201ENST00000411352 109 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 GPR143P-201ENST00000434155 205 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 MTCO2P3-201ENST00000442543 421 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AF186996.7-201ENST00000492781 209 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AC104383.1-201ENST00000530297 370 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AC022878.1-201ENST00000530684 149 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 AC092634.7-201ENST00000621022 103 ntBASIC-0.02□□□□□ -2.41
LYSMD1Q96S90 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MTND4P9-201ENST00000507819 1346 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MIR1-1-201ENST00000362147 71 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 SNORA1B-201ENST00000362535 133 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RNY4P34-201ENST00000364779 95 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RNU6-716P-201ENST00000365621 103 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MIR573-201ENST00000384964 99 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MIR7-2-201ENST00000384970 110 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 SNORD111-201ENST00000408139 94 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC073261.1-201ENST00000429409 121 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC079781.2-201ENST00000446424 169 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MRPS10P1-201ENST00000448483 130 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MTCO3P10-201ENST00000455912 772 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 HMGN2P26-201ENST00000463169 339 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RPS29P27-201ENST00000463711 170 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC007215.1-201ENST00000464893 276 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC091021.1-201ENST00000468051 388 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC079140.5-201ENST00000507882 310 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC074133.1-201ENST00000515696 183 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RNU7-41P-201ENST00000515917 61 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 RNU6-344P-201ENST00000516635 111 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MTND2P32-201ENST00000521584 1038 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AC022523.2-201ENST00000561045 150 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 AL008636.1-201ENST00000625038 1018 ntBASIC-0.03□□□□□ -2.41
LYSMD1Q96S90 MTND4P4-201ENST00000439033 1366 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIRLET7C-201ENST00000362160 84 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 RNU6-654P-201ENST00000364373 107 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms