Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.53□□□□□ -2.49
IFT140Q96RY7 MIR8064-201ENST00000612863 90 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 RNU6-369P-201ENST00000362515 102 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 MIR520C-201ENST00000385005 87 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 MIR586-201ENST00000385035 97 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 MT-TQ-201ENST00000387372 72 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 CALM2P2-201ENST00000428512 440 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 SNAP23P1-201ENST00000433229 246 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 RNU7-56P-201ENST00000458744 62 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 RNU7-28P-201ENST00000516759 62 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 MIR4743-201ENST00000584576 69 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC005176.2-201ENST00000596933 147 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC073539.2-201ENST00000597113 165 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC108747.1-201ENST00000609508 535 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC138749.5-201ENST00000611461 208 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 snoU13.21-201ENST00000459368 105 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC105185.1-201ENST00000518705 535 ntBASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.54□□□□□ -2.5
IFT140Q96RY7 AC005592.1-201ENST00000566527 1640 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 RNU6-621P-201ENST00000364752 109 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 RNU4-9P-201ENST00000364951 139 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.55□□□□□ -2.5
IFT140Q96RY7 RNU6-221P-201ENST00000459541 99 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AC087894.1-201ENST00000538359 518 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AC026470.2-201ENST00000561492 181 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 AC012467.1-201ENST00000607740 256 ntBASIC-0.55□□□□□ -2.5
IFT140Q96RY7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 RPS29P13-201ENST00000402041 169 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 RNA5SP95-201ENST00000410319 137 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 RPS26P42-201ENST00000413485 326 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 AC009237.7-201ENST00000447357 229 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 AP001372.4-201ENST00000524889 472 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 AC013828.2-201ENST00000532487 235 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.56□□□□□ -2.5
IFT140Q96RY7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.56□□□□□ -2.5
IFT140Q96RY7 MTND4LP25-201ENST00000570218 163 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 RNU6-88P-201ENST00000606801 100 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 AC072039.2-201ENST00000608883 439 ntBASIC-0.56□□□□□ -2.5
IFT140Q96RY7 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 RNU6-756P-201ENST00000383997 107 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 MIR153-2-201ENST00000385225 87 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 SNORA40.2-201ENST00000390847 128 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 MIR892B-201ENST00000401279 77 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.57□□□□□ -2.5
IFT140Q96RY7 USP9YP11-201ENST00000427537 717 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AC117522.1-201ENST00000509821 380 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 RNU2-56P-201ENST00000516826 190 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AC123904.2-201ENST00000548059 300 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.57□□□□□ -2.5
IFT140Q96RY7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AL078596.1-201ENST00000624856 447 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 AC006927.2-201ENST00000639256 389 ntBASIC-0.57□□□□□ -2.5
IFT140Q96RY7 MIRLET7C-201ENST00000362160 84 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 RNU6-674P-201ENST00000363831 107 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 MIR224-201ENST00000384889 81 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 MIR891A-201ENST00000401237 79 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.58□□□□□ -2.5
IFT140Q96RY7 MTND4P19-201ENST00000446659 478 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AC074198.2-201ENST00000508153 258 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AC023050.3-201ENST00000541142 333 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AC027288.2-201ENST00000553028 243 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AC068790.2-201ENST00000602601 557 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 AL355073.2-201ENST00000612106 557 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 SNORA43.4-201ENST00000629559 138 ntBASIC-0.58□□□□□ -2.5
IFT140Q96RY7 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 RNA5SP48-201ENST00000363969 126 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 AL392103.1-201ENST00000447000 198 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 MTCO3P8-201ENST00000453691 755 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 RNU7-159P-201ENST00000459284 62 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 AP000907.4-201ENST00000604143 237 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 AC131235.4-201ENST00000609288 620 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 AL008636.1-201ENST00000625038 1018 ntBASIC-0.59□□□□□ -2.5
IFT140Q96RY7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.59□□□□□ -2.5
IFT140Q96RY7 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 RNU6-224P-201ENST00000384055 107 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.6□□□□□ -2.5
IFT140Q96RY7 snoU13.6-201ENST00000458785 104 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC107401.1-201ENST00000503426 685 ntBASIC-0.6□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms