Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC013244.3-201ENST00000605614 388 ntBASIC-0.37□□□□□ -2.47
CCDC115Q96NT0 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
CCDC115Q96NT0 RNU6-833P-201ENST00000363486 107 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 RNU6-809P-201ENST00000384461 107 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 MIR520C-201ENST00000385005 87 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 PDCL2P1-201ENST00000419302 352 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 ELOCP4-201ENST00000420090 333 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 AL590632.1-201ENST00000424289 371 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 RNU6-344P-201ENST00000516635 111 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 RNU6-430P-201ENST00000517078 107 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 RNU6-58P-201ENST00000517143 103 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 MIR548AO-201ENST00000579992 96 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 AC091948.2-201ENST00000636510 279 ntBASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC115Q96NT0 RNU6-369P-201ENST00000362515 102 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 RNU6-654P-201ENST00000364373 107 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 SNORD115.1-201ENST00000391109 76 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 MIR320B2-201ENST00000408479 138 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 MRPS10P2-201ENST00000431226 381 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 HMGN2P26-201ENST00000463169 339 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AC007215.1-201ENST00000464893 276 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AC116562.3-201ENST00000506136 177 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 RNA5SP285-201ENST00000516619 119 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 RNA5SP94-201ENST00000516917 108 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AC068587.5-201ENST00000528506 175 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AC093027.1-201ENST00000546698 429 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 FRG2DP-202ENST00000566967 323 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 MIR4438-201ENST00000585271 93 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 AL008636.1-201ENST00000625038 1018 ntBASIC-0.39□□□□□ -2.47
CCDC115Q96NT0 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 RNU6-550P-201ENST00000391057 101 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC112204.1-201ENST00000502591 103 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 RNU1-117P-201ENST00000517041 158 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 RPL23AP91-201ENST00000569211 455 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC068790.2-201ENST00000602601 557 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 AC138649.3-201ENST00000622154 254 ntBASIC-0.4□□□□□ -2.47
CCDC115Q96NT0 SNORA9.1-201ENST00000362412 131 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 U8.7-201ENST00000364940 136 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 SNORA75.6-201ENST00000391318 127 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 RNA5SP494-201ENST00000410653 129 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 MTND3P1-201ENST00000441336 220 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 AL392103.1-201ENST00000447000 198 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 RPS3AP17-201ENST00000472594 777 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 RNU6-323P-201ENST00000521915 107 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 AC104383.1-201ENST00000530297 370 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 RNU4-5P-201ENST00000607255 135 ntBASIC-0.41□□□□□ -2.48
CCDC115Q96NT0 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 RNU6-137P-201ENST00000363680 108 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 MRPL42P2-201ENST00000403169 426 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 MIR1185-2-201ENST00000408687 86 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 MTCO2P6-201ENST00000463134 685 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 RNU6-977P-201ENST00000516411 103 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 RNU2-46P-201ENST00000517038 113 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 SNORA74.3-201ENST00000517108 154 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AC010376.1-201ENST00000522101 334 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AP002004.2-201ENST00000531656 154 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 BNIP3P40-201ENST00000596017 556 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AL121992.2-201ENST00000606262 256 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 MIR8076-201ENST00000611401 83 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 AC010999.1-201ENST00000611856 324 ntBASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.42□□□□□ -2.48
CCDC115Q96NT0 ZNF204P-201ENST00000416749 2397 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 SNORA8.2-201ENST00000384372 139 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 MIR145-201ENST00000384967 88 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 MIR452-201ENST00000385020 85 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 MRPS10P1-201ENST00000448483 130 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 SNORA25.17-201ENST00000517184 124 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 MTND4LP18-201ENST00000526864 291 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AC080013.3-201ENST00000606839 578 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AL355073.2-201ENST00000612106 557 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 AC022418.1-201ENST00000624118 445 ntBASIC-0.43□□□□□ -2.48
CCDC115Q96NT0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms