Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 MRPL35P1-201ENST00000404272 572 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 SDAD1P3-201ENST00000427380 333 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 RAB28P5-201ENST00000427490 651 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 IPO7P1-201ENST00000442031 636 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC138Q96M89 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC138Q96M89 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 Y_RNA.676-201ENST00000516393 96 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC138Q96M89 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC138Q96M89 MIR4659A-201ENST00000580269 81 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 AL109918.3-201ENST00000603072 338 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 AC022513.1-201ENST00000624512 117 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 U6.92-201ENST00000636464 89 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 MIR3674-201ENST00000636576 68 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC138Q96M89 AC091812.1-201ENST00000432235 1948 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 SNORD14.1-201ENST00000365609 90 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AL512604.1-201ENST00000404812 257 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AL354751.2-201ENST00000415471 210 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC112492.4-201ENST00000456549 352 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC010469.2-201ENST00000496412 480 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 Y_RNA.711-201ENST00000516993 102 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC138Q96M89 MIR3684-201ENST00000579779 74 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 MIR3171-201ENST00000584270 74 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC044792.1-201ENST00000593294 196 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 AC240442.1-201ENST00000616055 283 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 CTSLP2-204ENST00000629029 392 ntBASIC2.34□□□□□ -2.03
CCDC138Q96M89 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CCDC138Q96M89 MIRLET7G-201ENST00000362280 84 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 RNA5SP276-201ENST00000362580 94 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 RNU6-862P-201ENST00000362804 105 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 snoU2-30.2-201ENST00000362805 70 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 Y_RNA.424-201ENST00000384063 103 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 MIR504-201ENST00000385065 83 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 AL158823.1-201ENST00000418441 478 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 AC005534.2-201ENST00000431047 433 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 RPL26P26-201ENST00000480251 434 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 AL163540.1-201ENST00000485382 386 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 RNVU1-2-201ENST00000516326 135 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 RNA5SP24-201ENST00000516478 95 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC138Q96M89 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC138Q96M89 AC020661.2-201ENST00000560114 134 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 AC011476.5-201ENST00000615594 130 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
CCDC138Q96M89 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CCDC138Q96M89 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC138Q96M89 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC138Q96M89 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC138Q96M89 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 RNU4-82P-201ENST00000362443 140 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 Y_RNA.148-201ENST00000363557 117 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 RNU6-961P-201ENST00000363893 105 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 SNORA22B-201ENST00000383876 138 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 AL117342.1-201ENST00000404861 406 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC138Q96M89 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 HMGN2P34-201ENST00000437647 269 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 RPL23AP3-201ENST00000453844 468 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC138Q96M89 AC040926.1-201ENST00000530195 238 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 AL121655.1-201ENST00000605811 308 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC138Q96M89 AC010205.1-201ENST00000616668 449 ntBASIC2.32□□□□□ -2.04
CCDC138Q96M89 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC138Q96M89 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC138Q96M89 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC138Q96M89 Y_RNA.202-201ENST00000364083 110 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 RNU1-96P-201ENST00000364163 162 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 RNU4-50P-201ENST00000364361 141 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 RNU6-1227P-201ENST00000383981 107 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 AC099677.2-201ENST00000436385 175 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 AC021269.2-201ENST00000532318 330 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 AL390123.1-201ENST00000603216 237 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 Y_RNA.772-201ENST00000606692 102 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms