Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC005176.2-201ENST00000596933 147 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AL109918.3-201ENST00000603072 338 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AC022202.1-201ENST00000613515 211 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 MIR376A1-201ENST00000616574 68 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AC012640.5-201ENST00000623897 319 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 MIR3674-201ENST00000636576 68 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 LINC02555-201ENST00000563933 1951 ntBASIC2.65□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.222-201ENST00000364264 102 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-713P-201ENST00000384761 107 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 IPO7P1-201ENST00000442031 636 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC074290.1-201ENST00000448883 135 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC016717.1-201ENST00000448918 286 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 LINC01399-202ENST00000458450 244 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC121758.2-201ENST00000553271 193 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC055872.1-201ENST00000570978 278 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 MIR4300-201ENST00000581016 96 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC103810.6-201ENST00000606708 136 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 AC004467.1-201ENST00000615678 330 ntBASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDK5RAP3Q96JB5 SNORA6-201ENST00000384033 151 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-418P-201ENST00000384035 107 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-1310P-201ENST00000384153 107 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 SNORD23.1-201ENST00000408212 104 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-121P-201ENST00000410525 99 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 RNU5A-5P-201ENST00000411054 116 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 MTCYBP9-201ENST00000431021 303 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 NDUFB4P10-201ENST00000452541 359 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 AP002001.1-203ENST00000534002 267 ntBASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
CDK5RAP3Q96JB5 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.230-201ENST00000364348 109 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 SNORD63-201ENST00000384262 68 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.462-201ENST00000384268 102 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-975P-201ENST00000384296 105 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 MIR568-201ENST00000385036 95 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 SNORD115-46-201ENST00000390982 71 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 RPL21P38-201ENST00000418090 167 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AC123900.1-201ENST00000420390 96 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 TOMM22P2-201ENST00000430735 237 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AC098869.1-201ENST00000481627 292 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AP003733.2-201ENST00000529409 171 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AL031274.2-201ENST00000599419 203 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AC046143.2-201ENST00000609789 160 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AC091932.3-201ENST00000624223 323 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.63□□□□□ -1.99
CDK5RAP3Q96JB5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 AL596028.1-201ENST00000326971 197 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-1175P-201ENST00000365200 107 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 SNORD14D-201ENST00000384390 87 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.602-201ENST00000410535 92 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-57P-201ENST00000411348 103 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 SRIP3-201ENST00000413200 219 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-948P-201ENST00000516374 107 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 RNU7-110P-201ENST00000516891 62 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 AC011373.1-201ENST00000607270 237 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 AC013412.1-201ENST00000610687 192 ntBASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDK5RAP3Q96JB5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 MIR410-201ENST00000362222 80 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 SNORD113-8-201ENST00000363497 74 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.144-201ENST00000363521 113 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-196P-201ENST00000384315 107 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.570-201ENST00000384750 101 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 MIR1302-3-201ENST00000408128 138 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 MIR1185-2-201ENST00000408687 86 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 RNU4-30P-201ENST00000410245 143 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC009963.1-201ENST00000417265 157 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC139712.2-201ENST00000424302 339 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC010531.2-201ENST00000465012 153 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC025465.3-201ENST00000510570 311 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 MIR4423-201ENST00000580922 80 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 snoZ196.1-201ENST00000625269 89 ntBASIC2.61□□□□□ -1.99
CDK5RAP3Q96JB5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms