| PGAP3 | Q96FM1 | MIR502-201 | ENST00000606349 | 86 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | SCOC-AS1-203 | ENST00000609616 | 405 nt | TSL 3 BASIC | 1.73 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | WT1-AS_8.1-201 | ENST00000615200 | 275 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | MTND5P35-201 | ENST00000557537 | 1720 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.73 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | RNU6-222P-201 | ENST00000362438 | 107 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | Y_RNA.364-201 | ENST00000365532 | 101 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AL354864.1-201 | ENST00000373226 | 539 nt | TSL 2 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC016909.1-201 | ENST00000415916 | 166 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | LINC01701-201 | ENST00000419614 | 451 nt | TSL 2 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AL356010.2-201 | ENST00000422844 | 197 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | MTND3P10-201 | ENST00000450967 | 341 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | RNU4ATAC7P-201 | ENST00000516280 | 125 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC105029.1-201 | ENST00000520250 | 669 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC092138.2-201 | ENST00000563811 | 428 nt | TSL 5 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC090510.1-201 | ENST00000567456 | 425 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AP001109.1-201 | ENST00000587114 | 279 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | AC016925.2-201 | ENST00000605108 | 242 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.72 | □□□□□ -2.13 | | |
| PGAP3 | Q96FM1 | Y_RNA.184-201 | ENST00000363884 | 108 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | TOMM22P2-201 | ENST00000430735 | 237 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RPL23AP50-201 | ENST00000434149 | 455 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Y_RNA.635-201 | ENST00000459041 | 101 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RPL7P42-201 | ENST00000481005 | 679 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC103851.1-201 | ENST00000506833 | 274 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Y_RNA.691-201 | ENST00000516611 | 103 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AL137100.2-201 | ENST00000555786 | 315 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIR4285-201 | ENST00000581001 | 85 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC022432.1-201 | ENST00000595739 | 310 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | CEP162-201 | ENST00000257766 | 5063 nt | TSL 1 (best) BASIC | 1.71 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | SKIL-204 | ENST00000458537 | 7182 nt | APPRIS P1 TSL 1 (best) BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU6-338P-201 | ENST00000383888 | 105 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AL353997.1-201 | ENST00000432936 | 108 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU7-87P-201 | ENST00000459343 | 62 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU6-107P-201 | ENST00000516643 | 102 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | APOOP3-201 | ENST00000536787 | 586 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AP003174.2-201 | ENST00000544663 | 294 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AK6P2-201 | ENST00000549020 | 471 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC079907.1-201 | ENST00000552707 | 374 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | CENPF-206 | ENST00000614578 | 528 nt | TSL 5 BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC068733.3-201 | ENST00000632757 | 269 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNA5SP213-201 | ENST00000391031 | 106 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | EIF1P2-201 | ENST00000428233 | 350 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC073910.1-201 | ENST00000445047 | 438 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MTND4P18-201 | ENST00000447010 | 465 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AP003033.1-201 | ENST00000527244 | 415 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIR4422-201 | ENST00000581938 | 83 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Z84484.1-202 | ENST00000612718 | 60 nt | TSL 5 BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC022306.2-201 | ENST00000617563 | 647 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | TPTEP1-208 | ENST00000636884 | 213 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | TFEC-204 | ENST00000457268 | 6309 nt | TSL 3 BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Y_RNA.67-201 | ENST00000362870 | 100 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNA5SP190-201 | ENST00000365222 | 118 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AL513185.1-201 | ENST00000431638 | 162 nt | TSL 5 BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | ATP1B3-AS1-201 | ENST00000492725 | 376 nt | TSL 5 BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | HMGN1P12-201 | ENST00000499125 | 195 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC008243.1-201 | ENST00000504955 | 389 nt | TSL 3 BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | PRDX4P1-201 | ENST00000507189 | 574 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC004584.2-201 | ENST00000570407 | 410 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | SNORA77B-201 | ENST00000578179 | 125 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | FSD1L-201 | ENST00000374707 | 7062 nt | TSL 1 (best) BASIC | 1.68 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIPOL1-203 | ENST00000537471 | 5954 nt | APPRIS P1 TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | MIR126-201 | ENST00000362291 | 85 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | Y_RNA.404-201 | ENST00000383978 | 102 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RNU6-331P-201 | ENST00000384724 | 107 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | RPS20P15-201 | ENST00000412792 | 311 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | PDCL2P1-201 | ENST00000419302 | 352 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC092423.1-201 | ENST00000430165 | 186 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AL603825.1-201 | ENST00000438481 | 80 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | AC008080.3-201 | ENST00000440074 | 380 nt | TSL 3 BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| PGAP3 | Q96FM1 | HSPE1P24-201 | ENST00000450782 | 238 nt | BASIC | 1.67 | □□□□□ -2.14 | | |