Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC027575.1-201ENST00000481064 460 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR3935-201ENST00000583472 104 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC005014.2-201ENST00000607795 599 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC008873.1-201ENST00000625051 138 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR338-201ENST00000636369 67 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC068205.3-201ENST00000636385 468 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 SNORA72.1-201ENST00000363485 129 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.404-201ENST00000383978 102 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.405-201ENST00000383979 100 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.451-201ENST00000384200 100 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 SNORA67.2-201ENST00000384300 149 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.524-201ENST00000384564 100 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.561-201ENST00000384694 100 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 AC245047.4-201ENST00000433189 144 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.635-201ENST00000459041 101 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 MTND4P17-201ENST00000470444 350 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 AC105029.1-201ENST00000520250 669 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 UBE2V2P2-201ENST00000587677 504 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.61□□□□□ -2.15
SNRNP40Q96DI7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.2-201ENST00000362330 96 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 RNU6-1266P-201ENST00000362794 105 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.179-201ENST00000363844 90 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 RNU6-793P-201ENST00000384233 104 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 RNU6-417P-201ENST00000384712 107 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 RNU6-360P-201ENST00000390944 104 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 RNU6-159P-201ENST00000391080 106 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 MTND4P18-201ENST00000447010 465 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 UBL5P4-201ENST00000562584 236 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 MIR5695-201ENST00000579717 85 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 AC016925.2-201ENST00000605108 242 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 AC100812.1-201ENST00000607622 580 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 uc_338.20-201ENST00000621563 178 ntBASIC1.6□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 SNORD87-201ENST00000364849 89 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 RNU6-1240P-201ENST00000365155 104 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 SNORA75.4-201ENST00000391278 119 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AL117342.1-201ENST00000404861 406 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 RNA5SP504-201ENST00000410676 117 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 COX6CP10-201ENST00000416832 224 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 RPL7P42-201ENST00000481005 679 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AL117351.2-201ENST00000513571 157 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AC005730.3-201ENST00000583067 366 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AL669831.3-213ENST00000636676 183 ntBASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
SNRNP40Q96DI7 AC100821.1-201ENST00000523153 2479 ntBASIC1.59□□□□□ -2.16
SNRNP40Q96DI7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 U3.8-201ENST00000363675 217 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 MIR10B-201ENST00000385011 110 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 RNU1-139P-201ENST00000391307 165 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 USP9YP16-201ENST00000430287 407 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 MTND3P23-201ENST00000431980 347 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 USP9YP23-201ENST00000455085 407 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AP000870.1-201ENST00000472927 406 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 RNU6-107P-201ENST00000516643 102 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AP001094.1-201ENST00000579805 193 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AC005899.2-201ENST00000584353 90 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AL355802.3-201ENST00000607571 545 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SNRNP40Q96DI7 RNY1P16-201ENST00000363063 111 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU6-1188P-201ENST00000363795 107 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.415-201ENST00000384012 112 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms