Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SH3RF3Q8TEJ3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.15□□□□□ -1.9
SH3RF3Q8TEJ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA40.19-201ENST00000390846 128 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 AL714022.1-201ENST00000439897 151 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 CYCTP-201ENST00000504253 315 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA72.7-201ENST00000516349 94 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 AP004607.1-201ENST00000524456 203 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 MIR3613-201ENST00000579844 87 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 MIR4635-201ENST00000583759 79 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 AC005520.5-201ENST00000613926 164 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.802-201ENST00000614892 130 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3RF3Q8TEJ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-801P-201ENST00000364087 105 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.525-201ENST00000384570 113 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 MIR513C-201ENST00000401352 84 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU2-54P-201ENST00000410299 190 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 AC009963.1-201ENST00000417265 157 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 HMGN2P30-201ENST00000423237 256 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 SNRPEP9-201ENST00000436794 238 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RPL23AP58-201ENST00000440453 469 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 snoU13.6-201ENST00000458785 104 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-625P-201ENST00000459412 107 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-155P-201ENST00000516347 100 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA9.3-201ENST00000516383 129 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 AC127455.1-201ENST00000565496 145 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 MIR4744-201ENST00000581563 82 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 AL138963.2-201ENST00000605137 226 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 U6.99-201ENST00000637524 83 ntBASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SH3RF3Q8TEJ3 MTND5P35-201ENST00000557537 1720 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 RNY1P11-201ENST00000363759 113 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-898P-201ENST00000365627 104 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1056P-201ENST00000383996 107 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-142P-201ENST00000384019 107 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 SRIP1-201ENST00000489235 288 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 SCARNA8-201ENST00000515924 131 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AC021269.2-201ENST00000532318 330 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AC024614.2-201ENST00000577584 372 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AL356157.2-201ENST00000605122 111 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 AC069294.1-201ENST00000608397 350 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 U2.21-201ENST00000637295 81 ntBASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF3Q8TEJ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RNA5SP432-201ENST00000362480 116 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RNU4-10P-201ENST00000364383 140 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-755P-201ENST00000364400 103 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA72.2-201ENST00000365028 127 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.572-201ENST00000384757 98 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA26.5-201ENST00000391215 123 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AL365496.1-201ENST00000426885 215 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RPS20P10-201ENST00000451209 253 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AC092991.1-201ENST00000477176 376 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AC107027.2-201ENST00000512197 115 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RN7SKP164-201ENST00000516138 266 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 LINC00933-203ENST00000559812 219 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AL078604.3-201ENST00000615580 211 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 MIR6715A-201ENST00000615929 79 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 MIR6129-201ENST00000616087 109 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 AC024581.2-201ENST00000619986 252 ntBASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH3RF3Q8TEJ3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 SNORA67.4-201ENST00000384688 142 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 MIR626-201ENST00000385032 94 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 GPM6BP3-201ENST00000442797 145 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 RNU7-107P-201ENST00000459121 61 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms