Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC091179.3-201ENST00000474761 144 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC090525.1-201ENST00000479116 478 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AP005660.1-201ENST00000522972 293 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 MIR3145-201ENST00000580727 82 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AL713866.2-201ENST00000603579 219 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC013412.1-201ENST00000610687 192 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC004467.1-201ENST00000615678 330 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AL365265.1-201ENST00000621045 234 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 snoU18.1-201ENST00000629629 71 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AL137790.1-201ENST00000634283 177 ntBASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
SIMC1Q8NDZ2 AC131280.1-202ENST00000624067 4211 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-211P-201ENST00000384047 107 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-793P-201ENST00000384233 104 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 Y_RNA.498-201ENST00000384460 102 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 MIR3136-201ENST00000583498 78 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 AC091932.3-201ENST00000624223 323 ntBASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SIMC1Q8NDZ2 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-653P-201ENST00000363074 106 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 Y_RNA.441-201ENST00000384123 112 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 SNORA44-201ENST00000384584 132 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 MIR29B2-201ENST00000385055 81 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 AC003685.2-201ENST00000422795 395 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 AP002001.1-203ENST00000534002 267 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 U4atac.1-201ENST00000618345 95 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 AP006437.1-201ENST00000641440 3685 ntBASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.79□□□□□ -1.96
SIMC1Q8NDZ2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-81P-201ENST00000365608 104 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-245P-201ENST00000384020 107 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 AL161788.1-201ENST00000441805 169 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 IFNA11P-201ENST00000446352 526 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 RPS3P1-201ENST00000456781 192 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 HMGB3P3-201ENST00000510526 400 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 RNU6-155P-201ENST00000516347 100 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 CYP4A27P-201ENST00000567218 190 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 MIR5692C2-201ENST00000577959 77 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 MIR548AI-201ENST00000579940 88 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 AL356575.1-201ENST00000603008 283 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 AC108706.1-201ENST00000611053 297 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 SNORD98-201ENST00000636377 67 ntBASIC2.78□□□□□ -1.96
SIMC1Q8NDZ2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
SIMC1Q8NDZ2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-727P-201ENST00000363592 107 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 SNORA71.1-201ENST00000364523 117 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AL357139.1-201ENST00000407792 426 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU2-54P-201ENST00000410299 190 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU5E-9P-201ENST00000411164 104 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AIG1P1-201ENST00000503376 148 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 RNU5F-2P-201ENST00000516066 82 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 MIR3945-201ENST00000581853 98 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 DEFB117-201ENST00000602356 141 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AP001485.1-201ENST00000604799 199 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AL008718.3-201ENST00000610217 321 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 AC005520.5-201ENST00000613926 164 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.77□□□□□ -1.97
SIMC1Q8NDZ2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 MIR449A-201ENST00000362113 91 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-1310P-201ENST00000384153 107 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 MIR208B-201ENST00000401172 77 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms