Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC245884.10-201ENST00000597355 337 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 SNORD11B-201ENST00000607707 90 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 AC004832.4-201ENST00000608952 331 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 AL096861.1-201ENST00000610899 123 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 AC087683.2-201ENST00000611384 326 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
ZNF439Q8NDP4 RNU6-553P-201ENST00000364047 96 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 RNU6-245P-201ENST00000384020 107 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 RNU6-424P-201ENST00000384367 105 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 SNORD99-201ENST00000408612 74 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 MIR1185-2-201ENST00000408687 86 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AC133104.1-201ENST00000429100 218 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AC092423.1-201ENST00000430165 186 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 MTCO2P11-201ENST00000431069 680 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AL356010.1-201ENST00000456364 102 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 RPL23AP75-201ENST00000491601 451 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 SNORA14.1-201ENST00000516113 141 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AC027419.1-201ENST00000522976 328 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AL391903.3-201ENST00000612158 163 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.28□□□□□ -2.36
ZNF439Q8NDP4 RNU6-1266P-201ENST00000362794 105 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNU6-517P-201ENST00000384362 110 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP219-201ENST00000390940 113 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNU1-139P-201ENST00000391307 165 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 MTND2P18-201ENST00000419962 1030 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1038P-201ENST00000516516 104 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNU7-28P-201ENST00000516759 62 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP54-201ENST00000516951 92 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 RNU6-232P-201ENST00000517144 64 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 SCOCP1-201ENST00000554676 349 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 MIR3915-201ENST00000578518 97 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 MIR3192-201ENST00000584920 77 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 MIR4424-201ENST00000585257 86 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 AL117336.2-201ENST00000602435 335 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 AC016597.2-201ENST00000613256 341 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 AF246928.1-201ENST00000623768 87 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 AC079248.2-201ENST00000623779 326 ntBASIC0.27□□□□□ -2.37
ZNF439Q8NDP4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1329P-201ENST00000365664 107 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.381-201ENST00000365666 102 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL663109.1-201ENST00000411498 844 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL358934.1-201ENST00000432346 324 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 MTND4P32-201ENST00000437189 1237 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC104332.1-201ENST00000440471 797 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 DAP3P1-201ENST00000441522 278 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC073415.1-201ENST00000449240 153 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 OR9P1P-201ENST00000496431 281 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC091133.4-201ENST00000511142 308 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC092436.3-201ENST00000511788 257 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC022868.1-201ENST00000517767 391 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 MTND1P35-201ENST00000526739 508 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL118558.2-201ENST00000556294 238 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC009094.1-201ENST00000564443 426 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 CPDP1-201ENST00000579660 283 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC004223.2-201ENST00000590309 544 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 uc_338.34-201ENST00000617467 174 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC244015.1-201ENST00000622301 99 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC068787.1-201ENST00000623908 691 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC007494.3-201ENST00000624660 743 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 FER-210ENST00000628534 558 ntTSL 5 BASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AC005592.1-201ENST00000566527 1640 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 AL589743.1-201ENST00000551932 2712 ntBASIC0.26□□□□□ -2.37
ZNF439Q8NDP4 MIRLET7C-201ENST00000362160 84 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1120P-201ENST00000362988 108 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 RNY1P8-201ENST00000383970 114 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 MIR562-201ENST00000384894 95 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 MIR526A1-201ENST00000384897 85 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 SNORD89-201ENST00000390981 114 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AL049545.1-201ENST00000401856 572 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 MTATP6P18-201ENST00000417994 673 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AL162725.1-201ENST00000435405 301 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms