Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC33Q8N5R6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC33Q8N5R6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC33Q8N5R6 RNU1-58P-201ENST00000362413 163 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 RNU6-961P-201ENST00000363893 105 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 SNORA63.7-201ENST00000365579 123 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.422-201ENST00000384054 114 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 MIR518A2-201ENST00000384966 87 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AL590004.1-201ENST00000405321 300 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 MIR1283-2-201ENST00000408621 87 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 RNU6-101P-201ENST00000410323 104 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 RPEP5-201ENST00000441137 268 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 RNU6-1137P-201ENST00000517073 99 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AP002001.1-203ENST00000534002 267 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 MIR3169-201ENST00000578032 83 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AL109918.3-201ENST00000603072 338 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AC124312.5-201ENST00000604451 268 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AL590240.4-201ENST00000616908 390 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AC007742.2-201ENST00000618226 398 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AL162373.1-201ENST00000620433 407 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 AC130454.1-201ENST00000622948 401 ntBASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC33Q8N5R6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 SNORD115-3-201ENST00000363100 82 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.389-201ENST00000383924 113 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.455-201ENST00000384230 98 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 RNU6-408P-201ENST00000515910 100 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 RNU6-107P-201ENST00000516643 102 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 MIR4524B-201ENST00000581569 115 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC33Q8N5R6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 RNA5SP493-201ENST00000364115 91 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 RNU6-450P-201ENST00000364654 107 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.471-201ENST00000384312 102 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 MIR1252-201ENST00000408861 65 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 RNU6-57P-201ENST00000411348 103 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 BX510359.4-201ENST00000423750 193 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 RPS15AP28-201ENST00000435088 386 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AL353689.1-201ENST00000438895 199 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AC113195.1-201ENST00000579952 141 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 PART1_1.1-201ENST00000611761 217 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 MIR3674-201ENST00000636576 68 ntBASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC33Q8N5R6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.380-201ENST00000365663 111 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 RNA5SP465-201ENST00000391195 109 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 AL079342.1-201ENST00000401460 267 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 RNU6-985P-201ENST00000410182 104 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 RNU6-130P-201ENST00000411112 103 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 AL356320.1-201ENST00000429616 163 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 U8.20-201ENST00000459445 131 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 AC006504.6-201ENST00000590142 199 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.42□□□□□ -2.02
CCDC33Q8N5R6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 MIR1289-2-201ENST00000408360 111 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC016909.1-201ENST00000415916 166 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 IPO7P1-201ENST00000442031 636 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 RNU6-764P-201ENST00000516396 105 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC025647.1-201ENST00000517879 253 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 MIR4769-201ENST00000584126 77 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC067747.1-201ENST00000608026 250 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 AC099654.10-201ENST00000640395 161 ntBASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC33Q8N5R6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC33Q8N5R6 AC131280.1-202ENST00000624067 4211 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms